|
Name : hslU (N220_00715) Accession : YP_008337623.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : ATP-dependent protease Function : - COG functional category : - COG ID : - EC number : - Position : 140770 - 142092 bp Length : 1323 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCAATGACACCCCGTGAAATCGTCTCAGAATTAGACGCACACATTATCGGACAAAAAGATGCAAAACGTGCGGTAGC AATTGCTTTGCGTAACCGCTGGAGAAGAATGCAGTTGCCGGAAGATCTCCGCCAAGAAGTGACCCCCAAAAATATTTTAA TGATCGGTCCGACCGGTGTGGGTAAAACCGAAATCGCCCGCCGTTTGGCGAAGCTTGCCAATGCCCCTTTTATCAAAGTT GAGGCAACCAAATTCACTGAAGTGGGGTATGTGGGTAAAGAAGTGGATTCGATTATCCGTGATCTAGCTGATGTGTCGAT GAAATTAGTCCGCCAACAAGCGGTCGAAAAAAATAAAATGCGTGCACAAGATGCAGCGGAAGATCGCATTTTAGACGTAT TATTGCCACCGGCGAAAGATCAGTGGGGAAATGTGCAGGAATCCGACAATAATTCTACCCGCCAAACTTTCCGCAAAAAA TTGCGTGAAGGGCAATTAGACGATAAAGAGATTGAAATTGACGTGGCAGCTCAAGTGAGCGTTGAGATTATGACCCCGCC GGGAATGGAAGAGATGACCTCGCAATTACAATCGCTGTTTGAGGGAATGTCGCCAAGCAAAACCAAAAAACGCAAAATGA AAATCAAAGATGCGTTAAAGGTGATGCTTGATGAAGAAGCGGCGAAATTAGTAAATCCTGAAGAGCTGAAACAGCAAGCG ATTGAAGCGGTGGAACAGCACGGTATTGTCTTTATTGATGAGATCGACAAAATCTGTAAAAAAGGCGAGCATTCGGGTGG AGATGTTTCTCGTGAAGGTGTTCAGCGTGATTTACTTCCAATCATTGAAGGCTCAACGGTAAATACCAAGCATGGTATGG TGAAAACCGACCATATTCTGTTTATCTGCTCGGGGGCATTCCAAGTGGCTCGCCCGTCTGATTTACTCCCAGAATTACAG GGTCGCTTGCCGATTCGTGTGGAGTTAAAATCGCTTACCAAAGAAGATTTTGAGCGTATTTTAACCGAACCGAATGCCTC ATTAACCTTGCAATATCGTGAGTTGATGAAAACTGAAGGCGTGGAGATTGAGTTCACTAAAGACGGTATCAGCCGTATTG CAGAAAGTGCATTCCGTGTGAACGAGAAAACCGAAAACATCGGGGCAAGACGTTTACACACCGTGCTTGAGCGTTTGATG GACGGCATTTCGTTCGATGCCAGCGAACGCCGTGGTGAAAAAATCATCATTGATGAAAACTATGTTTCCGAAGCGTTAAA TGACGTGGTGGAAAACGAAGATTTAAGTCGCTTTATTTTGTAG Protein sequence : MSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDLRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV EATKFTEVGYVGKEVDSIIRDLADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRKK LREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKDALKVMLDEEAAKLVNPEELKQQA IEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQRDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQ GRLPIRVELKSLTKEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARRLHTVLERLM DGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 8e-98 | 46 |
