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Name : N220_00685 (N220_00685) Accession : YP_008337617.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Virulence Product : hemolysin D Function : - COG functional category : - COG ID : - EC number : - Position : 131594 - 133030 bp Length : 1437 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAATATGGCTTAGTGGTATTTATGAATTTTTCCTACGCTATAAAAACATTTGGGCAGAAGTATGGAAAATTCGTAA AGAATTAGACCACCCAAACAGAAAAAAAGACGAAAGTGAATTTTTACCGGCACATTTAGAACTGATTGAAACCCCGGTTT CTAAAAAACCACGTCTAATTGCTTATTTGATTATGCTATTTTTAGTTGTGGCAATTGTGCTTGCCAGTGTAAGCAAAGTT GAAATTGTGGCGACTGCTCCCGGTAAATTAACTTTTAGTGGCAGAAGTAAAGAAATTAAACCGATTGAAAACGCCATTGT ACAAGAAATTTTCGTTAAAGATGGGCAGTTTGTGGAAAAAGGGCAATTATTAGTCAGCTTAACTGCATTGGGTTCTGATG CAGATATCAAAAAGACCATGGCTTCACTTTCTTTAGCTAAACTGGAGAACTATCGCTACCAAACTTTGCTTACTGCCATT GAAAAAGAGTCCTTGCCGGTGATTGATTTATCTAGAACCGAATTTAAAGATTCATCGGAAGAAGATCGACTACGTATTAA ACACTTAATTGAGGAGCAATACACCACTTGGCAAAAACAAAAAACACAGAAAACTTTAGCGTATAAGCGTAAAGAGGCTG AAAAACAAACAATATTTGCCTATGTCCGTAAATATGAAGGTGCAACACGTATTGAACAAGAAAAATTAAAAGACTTTAAG GCACTTTATAAACAGAAGTCTTTATCTAAGCACGAACTTCTTGCGCAAGAAAATAAATTAATTGAGGCTCAGAATGAGCT AGCTGTTTATCGCTCAAAATTAAATGAATTAGAAAATGATCTACTCAATGTAAAAGAAGAACTTGAATTGATCACGCAAT TCTTTAAAAGCGATGTGTTGGAAAAATTAAAGCAACATATTGAAAATGAACGCCAACTTCGGCTCGAGTTAGAAAAAAAT AATCAACGCAGACAGGCCTCGATGATCAGAGCACCGGTTTCCGGTACGGTTCAGCAACTGAAAATTCACACTATAGGTGG TGTTGTTACGACTGCTGAAACCTTGATGATCATTGTGCCGGAAGACGATGTGTTAGAGGCCACCGCTCTGGTTCCAAACA AAGATATCGGCTTTGTTGCAGCAGGGCAGGAGGTGATTATTAAAGTGGAAACTTTCCCTTATACACGCTATGGTTATCTA ACTGGTCGAATTAAACATATTAGCCCGGATGCGATTGAACAACCTAATGTAGGCTTAGTTTTTAATGCAACTATAGCTAT AGATAGGAAGAATCTAACATCGCCTGATGGGCGAAAAATTGATTTGAGTTCAGGTATGACAATAACTGCTGAAATCAAAA CCGGTGAACGGAGTGTAATGAGTTATTTACTCAGCCCATTAGAAGAATCTGTCACAGAAAGTTTAAGGGAACGCTAA Protein sequence : MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPAHLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKV EIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQEKLKDFK ALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKN NQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYL TGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESVTESLRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyD | NP_755449.1 | hemolysin D | Virulence | PAI I CFT073 | Protein | 2e-135 | 60 |
| hlyD | AAC61717.1 | chromosomal hemolysin D | Virulence | PAI I CFT073 | Protein | 1e-119 | 60 |
| hlyD | CAD33761.1 | Hemolysin D | Virulence | PAI I 536 | Protein | 5e-135 | 60 |
| hlyD | CAD42037.1 | HlyD protein | Virulence | PAI II 536 | Protein | 3e-135 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N220_00685 | YP_008337617.1 | hemolysin D | VFG1502 | Protein | 3e-135 | 60 |
| N220_00685 | YP_008337617.1 | hemolysin D | VFG0908 | Protein | 8e-136 | 60 |
| N220_00685 | YP_008337617.1 | hemolysin D | VFG1556 | Protein | 2e-135 | 60 |
| N220_00685 | YP_008337617.1 | hemolysin D | VFG0843 | Protein | 3e-108 | 51 |
