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Name : N220_06560 (N220_06560) Accession : YP_008338763.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : peptide transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1273023 - 1274819 bp Length : 1797 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCTTACTTATTTGATCTTATGAAAACCCCACAAAATCTGATTTTAAGCACGGTATTGTTAAGTGCTTCTTTTGTTGC TGAAGCAAATTCTTCAAGCCTTGTACAACAAGCACGCATTGATGCAACTCAACAACAAATTGATGCTGCCCAGCAACATC GCCAACAGCAATACCAACAAAATCAAGCAGAAAAATTCCAGCCGAAAGCTGATGTACGGCTCGAGACACAAATCAATGAT ACACTTACTCTTTCCAATCACGAATTGCCTTGTTACCCCATTCATCAAATCACTCTCATTGACTATTCTCCTGACAATTC TCTGACTACCAGCCAATTCCAATGGGCGTTTGAAAAAGCAGTAAAATCATTTCATTTGACATTACCTCACTGCTTTGGTG GTGAAGGGTTAGCTGTGTTGATGAAGCAAATCCAAAATGAAATTATTGGCAAAGGTTATGTCACTACACGAGTGGTTACT GCGGAGCAAGATTTACGTGGCGGAAAATTAGTTTTAACCGTGATTCCGGGCAAAATACGCAATACTTTAGTGGTAGATAG CGGCAAAGTACCGCGTTTTACCAAGCTGCACGCCTTAACCGGTTTTACTTTTGCCGAAGGCGATATTCTGAATGTGCGAG ATATTGAGCAGTCTCTGGAAAATCTAAAACGGGTGCCGACGGCGGAGGCAAATATTGAGATTTTACCCAGCTCAAGCGAA AAAGCGGAGGTGGGAGACAGTGATTTAAAAATCAGCTATTCGCAAGCGTTTCCATTTCGCTTAAATCTTGGGCTGGACGA TGCCGGCTCGAAATCCACAGGCAAATTACAAACCTCCGCCACTCTGTCTATAGATAATATTTTTTCGGCAAATGACCTGT TCTATACCTCTTTTACCCATTCGATGAAACAAAAAGGTGATGATAACGGCAGACGTGCCAGTAAAAATCTCACGCTTTAC TATTCCGTGCCGTTTGGCTATTGGCAGTTAGCATTTTCACACACTCATCATCGTTATCATCAAGAAGTATTTGGTGCCTT TGACAAGAGCTATCTCTACGCCGGTGAAAGTGATACCGATAAATTAACCTTTTCTTATTTGCTTTATCGTGATGCCAAAC GTAAAACGAGCTTGTCCGGTTCACTTTGGCCACGCCAGTCGCAAAACTATATTGACGGCTCAGAAATTGAAGTACAAAAA CGCCGAATGGCAGGTTGGGAAGCGGGTTTTTCGCATAAAGAATATTTCCCGACCGCTACGCTTGAGCTTTCGGCTAATTT CAAACGAGGTACGGCAGCACGAGGGGCATTATCTGCTCCCGAGGAAGATTATGGCGAAGGGACTTCTCGCCCTAAAATCA TCACGGCAAGTGCAAGCCTGACGAAACCGTTTTTTTGGGGCAAGCAGCCATGGCAGTGGCAAAGTAGCCTAAATGCCCAA TGGAATAAAACCCCTCTGGTTCCGCAAGACCGTTTTTCGATTGGCGGGCGTTACACCATACGTGGATTTGACGGTGAACT GACTCTTTCCGGTGAGCGGGGCTGGAACTGGCGTAATGAGTTGAGCTGGCAATTTAATCCGAACCACGCTTTTTATTGGG CGGTAGATGGTGGTCGAGTGTCCGGTTGGGCAACGGAAAATCAGCTCGGACATCATTTAATGGGAACAGCCATTGGGTTT CGGGGTGGAGTTAAAGGATTTAGTTATGACGTGTTTGCCGGTAGACCGATGCGAAAACCGGAAGGGTTTAAAACCTCAGA CACCGTTGCCGGTTTTAATATTGGTTACAATTTTTAA Protein sequence : MSYLFDLMKTPQNLILSTVLLSASFVAEANSSSLVQQARIDATQQQIDAAQQHRQQQYQQNQAEKFQPKADVRLETQIND TLTLSNHELPCYPIHQITLIDYSPDNSLTTSQFQWAFEKAVKSFHLTLPHCFGGEGLAVLMKQIQNEIIGKGYVTTRVVT AEQDLRGGKLVLTVIPGKIRNTLVVDSGKVPRFTKLHALTGFTFAEGDILNVRDIEQSLENLKRVPTAEANIEILPSSSE KAEVGDSDLKISYSQAFPFRLNLGLDDAGSKSTGKLQTSATLSIDNIFSANDLFYTSFTHSMKQKGDDNGRRASKNLTLY YSVPFGYWQLAFSHTHHRYHQEVFGAFDKSYLYAGESDTDKLTFSYLLYRDAKRKTSLSGSLWPRQSQNYIDGSEIEVQK RRMAGWEAGFSHKEYFPTATLELSANFKRGTAARGALSAPEEDYGEGTSRPKIITASASLTKPFFWGKQPWQWQSSLNAQ WNKTPLVPQDRFSIGGRYTIRGFDGELTLSGERGWNWRNELSWQFNPNHAFYWAVDGGRVSGWATENQLGHHLMGTAIGF RGGVKGFSYDVFAGRPMRKPEGFKTSDTVAGFNIGYNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 7e-99 | 42 |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 1e-80 | 41 |
