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Name : N220_00620 (N220_00620) Accession : YP_008337604.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.5 Position : 118212 - 119531 bp Length : 1320 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCTAACTATTTCGACAAAATCTCAAAAGTACAATATGAAGGGGCTAATTCCACCAACCCGTTTGCATTCAAACATTA CAACCCGGATGAAGTGGTTTTAGGCAAAACGATGGCAGAACATCTGCGGTTAGCGGTTTGCTATTGGCACACCTTCTGCT GGACGGGTAACGATATGTTTGGCGTGGGTTCGCTTGACAGAAGCTGGCAAAAAACGGGGGATTTACTGCAAGGTGCGAAG CAAAAAGCGGAAATTGCCTTTGAATTTTTCCAAAAATTAGGCATTCCTTACTACTGCTTCCACGATGTGGATGTTGCACC GGAAGGCAACAATTTCAAAGAATATCAGCACAATTTCAACACTATTGTGGATATTTTAGAGCAAAAACAAGCTGAAACAG GCGTGAAATTATTATGGGGTACGGCGAACTGCTTTACCAATCCTCGCTATATGTCGGGTGCTTCAACCAATCCGAATCCG GAAGTCTTTGCTTGGGCGGCAGCACAAGTCTTTACCGCAATGAACGCAACCAAACGCTTAGGCGGCGAAAATTATGTATT ATGGGGCGGACGTGAAGGTTATGAAACCCTACTCAACACTGACTTAAAACGTGAGCGTGAACAAATCGGTCGCTTTATGC AGTTAGTGGTGGAACATAAACACAAAATCGGTTTTAACGGCACTTTATTAATTGAGCCAAAACCACAAGAACCAACCAAA CATCAATATGACTACGATGTTGCCACCGTTTACGGTTTCTTAAAACAGTTTGGTCTAGAAAAAGAGATCAAAGTCAACAT TGAAGCAAACCACGCCACTCTTGCAGGGCATACTTTCCAACACGAAATTGCGACTGCCACCGCATTAGATATTTTTGGCT CGATTGATGCCAACCGAGGTGATCCGCAATTAGGTTGGGATACCGACCAATTCCCAAACAGCGTGGAAGAAAACACCCTT GTGATGTATGAAATCTTAAAAGCAGGTGGTTTCACAACGGGCGGTTTCAACTTTGATGCGAAAATCCGCCGCCAAAGTAC CGATCCGTATGATTTATTCCACGCACATATCGGGGCAATTGATGTGTTAGCCCTTTCGCTAAAACGTGCGGCAAAAATGC TGGAAGATCAAGCATTACAGAAAGTAGTAGATAACCGCTACGCTGGCTGGAACCAAGATTTGGGCTTACAAATTCTAAAC GGTAAAGCAAGCCTTGAAGATTTGGCAAAAATAGTGGAAACCCAAGGGTTAGATCCAAAACCTGTTTCCGGTCAGCAAGA ATATTTGGAAAATTTGGTAAATAGCTATATTTACCGTTAA Protein sequence : MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRLAVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAK QKAEIAFEFFQKLGIPYYCFHDVDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVEHKHKIGFNGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTL VMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQDLGLQILN GKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-106 | 50 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-106 | 50 |
