|
Name : N220_06025 (N220_06025) Accession : YP_008338659.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : tail protein Function : - COG functional category : - COG ID : - EC number : - Position : 1169609 - 1170847 bp Length : 1239 bp Strand : + Note : gpD; D protein; bacteriophage P2-like virions include a head and a tail; D protein contributes to tail formation; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGATTTTTTAACAGAGCTAACCAATCATAACCACCGCACACCGGCTGTTTCGGTGACGGTTCGCCCAAAGCCAAGCAA AGATAATGAGGGCGAAAAAGCCAAAGATATTTCCACCCTGATCACGCACCGCTTAATTCAACTCACCTTAACCGACAACC GAGGCTTTGAGGCAGACCAGCTGGATTTAGAGCTGGACGACACTGATGGCTTACTCGCTTTGCCAAGTCGAGGAGCGATT TTATCGGTCGGGTTAGGCTGGCAAAACAGCCCCCTGACCTACAAGGGCGAATACACGGTGGACGAGCTAACCCACGATGG CCCACCTGATAAAGTCACGATTCGGGCAAGAAGTGCTGATTTGCGAGGCACGCTGACCAATCGCCACGAGCGGAGCTTTC ACCGCACCACCATTGGTAAAATTGTGAAACAGATCGCCGAAGAGAACAAACTCAAGCCGATGGTGGGCAAGGAGTTTGAA AACGAAGAGGTGAAACACATTGACCAAACAAACGAAAGCTCTATTAATCTCTTGCAACGCCTCGCAGAACAATTTGATGC CATTGCTACCGTGAAAAACGGCAATTTGATTTTCATTAAAGCCGGAAACGCCACAACCGCAAGCGGTAAACTGTTACCCC TGTTTCGCATTACCCGCAGTTCGGGGGATTCCCATAGCTTTTCGATTGCCGAAGGGGATAACTACAAAGCGGTTAAAGCC TATTGGCACAACACGCAAACCGGCAAGCGAGGCGAGGTGACGTGGGACGAAAACAGCCAAGTTAAAAAAGTGACTAAGCC CACAATGCGGAAAAAGACTAAAGTAAAACGTGGGGCAGACGGCAAGCCGATAAAAGGCAAAGACGGCAAGAGCATTAAAG AGACCGTCTTTGTAAAAGGCAAAGGCAGGCAAGTTAATGCAGTGGTGCAAAGTAAACCGATTGAAAGTGATAGCGAGGCA ATTAAAACCCTACCCCATACTTACGCTACCGCACAATCAGCGATTAATGCTTGTAAACGGAATTTTGAAAAACTACAACG AGGTGTGGCAACTTTTAGCCTAACTCTTGCCGAGGGCAATGCGGAGCTTATCCCCGAATTACCGGTTCAGGTTTCAGGCT TTAAGGCGGAGATTGATAGCAACGAGTGGATAATTTCGCAGGTTACGCACAGTTTAAATAAAGGTGGTGGGTTTACGACA GCGTTAGAGATGGAGTTGAAGCCGAAGTCTGAAGACTAA Protein sequence : MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHRLIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAI LSVGLGWQNSPLTYKGEYTVDELTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFE NEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRITRSSGDSHSFSIAEGDNYKAVKA YWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVKRGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEA IKTLPHTYATAQSAINACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSLNKGGGFTT ALEMELKPKSED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 1e-68 | 45 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 1e-68 | 45 |
