|
Name : N220_05995 (N220_05995) Accession : YP_008338653.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : tail sheath protein Function : - COG functional category : - COG ID : - EC number : - Position : 1166530 - 1167711 bp Length : 1182 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCAATTTTAGATACCTATCTACACGGTGTTGAGGTGGTTGAGGTCAATGCAGGTGGTGTCACCATTTCCACCGCTGC TACTTCGGTTATCGGAGTAGTTTGCACCGGAGACCAAGCCGATGCCGAGACTTTTCCGCTGAATACGCCCGTTTTAATTA CTAACCCGTTAAATTACCTTGAAAAAGCAGGTAGCACCGGCACGTTACGCCGCACACTTAATTCGATTGGCTCAATCGTT AAAACGCCAACGGTGATCGTGCGAGTTGCCGAGTCGGACGATAGCGACACCTTAACTGCAAATATTGTCGGCACGCAGGA AAACGGCAAATTTACCGGTATTAAGGCGTTATTAACCGCTCAATCAACCGTGTTTGTTAAGCCGAAATTGCTTTGTGTAC CACAGCACGATAATCAAGCCGTTGCGACCGAACTATTAAGCGTGGCTAAAAAGCTGAATGCGTTTGCGTTTATTTCAGAC AACGGTGCAACCACCAAAGAACAGGCATATACCTATCGCCAGAATTTCTCTCAGCGTGAAGGAATGATGATCTTCGGTGA CTGGAAATCTTATAACACTGATAAAAAAGCCTATGATACCGATTATGCAGTGGCCCGAGCTTGTGCGTTGCAAGCCTATA TCGACAAAACTGTCGGCTGGCATAAAAACATCTCAAACGTAGAGCTAGACGGTGTAACCGGTATCACTAAAGCGGTAGAG TTTGATATTAACGAGAGCTCAACCGAGGCAAACTACCTGAACGAAAAAGGCATTACCATTTGCTTAAACCATAACGGTTT CCGCTATTGGGGTTCCCGCACTCTTGCCACCGATACCCGCTGGGCGTTTCAGCAGTCGGTGCGGACGGCTCAAATCATTA AAGAGACAATCGGAGCAGGCTTAGCTTGGGCGGTGGATATGCCACTCACACCGTTGCGTGTGAAAACAATGCTAGAGGCG ATTAACAACAAGCTACGCTCTTGGGCATCGGGTGATGACCCTCGCATTTTAGGTGCTCGTGTGTGGGTAGCTGAAGAGAT CACCGCAGATATTATCAAATCAGGCAAATTTGTTATTAAATACGATTACCATTGGATTCCGTCCCTCGAAAGCCTAGGCT TAGAGCAACGGGTCAATGATGAATATGTAGTGGATTTAGTCAATACACTTAAAGCGTTATAG Protein sequence : MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIV KTPTVIVRVAESDDSDTLTANIVGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVE FDINESSTEANYLNEKGITICLNHNGFRYWGSRTLATDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEA INNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 3e-74 | 46 |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 3e-74 | 46 |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 4e-63 | 43 |
