Gene Information

Name : N220_05880 (N220_05880)
Accession : YP_008338630.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Unknown
Product : oxidoreductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1150891 - 1151919 bp
Length : 1029 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAGATTTAACCCTTGAAAAATATAACGCCTACCTTGCACGCCAAGCTGAATTAAACAACTTGCCGTTTAATGCATT
GGCAACCGGCATTAAATTCACAGTGCAACCATCGGTACAGCAAAAGCTGTATGAAAAGGTGCGTGAAAGCTCTGATTTCT
TAAAATCTATCAGCTTTGTGTTTGTTGATGAGCAAACCGGTGAAACCTTAGGTTTAGATTCAGCTCACACCGTGGCCAGC
ACCACCGATACCAGCGGTGACGGTGAACGCAAAACCACCTCTATTGCGAAGTTGGTAAAACAAACCTACCACTGCCAACA
AATCAATTTTGACACCCATATCAATTATAAACAGTTGGATATGTGGGCGAAATTCCCTGATTTTCAGCAAAAAGTGGCGA
ATGTTGCGGCAAAACAACGCAAACGTGACTTAATTATGATCGGCTTTAACGGCACAAGTCGTGCGGCAACCAGTGATCGC
AACAGCAACCCGTTATTGCAAGATGTGGCAAAAGGCTGGTTGCAGAAAATGCGTGAAGATGCCAAAGAGCGTGTAATGAA
TGGCGAAAGCACAGACAACCAAGTTTTAGTCGGCAAAGGTCAAGAGTATGCCAATCTTGACGCACTCGTAATGGACGCCA
CCGAAGAACTTATTGATGAATGGCATCGTGATGACACCGATTTAGTGGTGATTACCGGTCGCAAGTTGCTTGCGGATAAA
TATTTCCCGATTGTGAATCAGCAAAACGCACCAACCGAAGAACTTGCCGCTGATATTGTGATCTCACAAAAACGCATTGG
GGGCTTAAAAGCGGTGCGTGTGCCGTTCTTCCCGGCGAATGCGATTTTAATCACTAAGCTGGAAAATTTAGCCATCTATG
TGCAAGAGGGGACAACCCGCAAGCATATTGAGAACGTGCCGAAAAAAGACCGTATTGAAACCTACGAATCAGAAAATATC
GACTACGTTGTCGAAGATTATGGCTGTGCGGCATTAATCGAAAACATTACACTCAAAGATAAAGAGTAA

Protein sequence :
MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLYEKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVAS
TTDTSGDGERKTTSIAKLVKQTYHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELIDEWHRDDTDLVVITGRKLLADK
YFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPFFPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENI
DYVVEDYGCAALIENITLKDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 1e-79 54
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 1e-79 54
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 4e-74 48