Gene Information

Name : N220_05870 (N220_05870)
Accession : YP_008338628.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Unknown
Product : oxidoreductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1148098 - 1149936 bp
Length : 1839 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCTTAAACAAGGTGGATTTTTGATAATCGCACCTATGGAAAATGAAAATACAATCACTGAATACGAGGTGTTGGCTGC
CAACCCTCTACACGATAAACGAGAGGCTCAATCAAAGTATTGGGCAGGTTACACCGTGACCGAAATTTCTCGTCAGCTAA
ATATTCCCGTCTCTACCATTGCAAGTTGGAAAAAGCGAGAGAAATGGGACGAAATCAGCCCCGTTGGACGTGTGGAAGCC
ACACTGGAATCACGGCTGAATTTGCTGATTATGAAAGAGAGCAAAAACAATAACGACTACAAAGAAATGGATGCTTTACG
TCGGTTGTTGGAAAGTACAGCACGAATCAAAAAATATTCTAACGGCGGAGGTAATGAAGCCGACCTCAACCCAAATATTA
AAAACCGTAATAAAGGCGACCGCAAAAAGCCCGAGCAAAATGCCATTTCCGAAGAGCAAGCCGAACTGTTGATAAACGGC
TTTTTAGACGGAATGTTCCATTATCAGAAAAAATGGCACGAAGCTGGGCTGACTCATCGAATCCGCAATATTCTTAAAAG
TCGTCAAATTGGAGCGACTTATTATTTTGCTCACGAGGCGTTAGTTGATGCGTTAGTAACCGGTAGAAATCAGATTTTTA
TTTCCGCCTCGAAAAAACAGGCATTGCAATTTAGAGCCTATATTGTGGCATACGCCAAACGGGTTGCCGATGTGGAGCTA
AAAGGCGAAACCATTACCTTGCCGAACGAGTCTCAACTAATTTTCTTGGGTACAAACTCGAAAACGGCACAGTCTTACCA
CGGCAATCTCTATTTTGATGAAATCTTTTGGGTAAACCGCTTTGAGGAAATCCGCAAAGTGGCAGCGGGTATGGCGAGCC
AAAAACAATATCGGATTACTTATTTTTCTACCCCTTCGAGCATTACCCATTCCGCCTATCTGCTTTGGTCGGGCAAGCTG
TTTAACCGCAAACGTCCGAAAGCGGAACAGGTGGAAATTGATATTTCTCACGCCAACTTGAAAAACGGCAAAAAATGCGG
AGACGGCCAATGGCGACAAATCGTGAATATCTACGATGCCGAGGCAGGTGGCTGTAACCTGTTTGATATTGAGCAACTCA
AACTGGAAAACTCGCCCGATGAGTTCGAGCAGCTCTTTATGTGTGAGTTTATTGATGATAACCAGTCTGTGTTCAAGTTC
ACGATGATGCAACGTTGCCTTGTGGACTCGATGGAGGTGTGGCGAGATTATGTATTCACGGACGGCTACCAACGCCCATT
CGGCAATAAAGAGGTATGGGTTGGGTATGACCCGTCTTACACCGGCGACCGCTCGGCGTTGGTGGTAATCGCTCCGCCGA
AAGTGGACGGCGGGAAATTCCGACTATTAGAGTATCGCACTTTTAAAGGGGCTGATTTTGCCGAACAAGCGGCAGAAATT
GTCGCTATTTGTGCAAAATATAACGTGACCAGACTGGCGATTGATACCACAGGGCTTGGTGTCGGTGTTTATGAAATCGT
CAAAAAAGAACGACCAGATGCGGTGGCTCTTACTTACAACGTAGAGCTGAAATCCAAGATGGTACTAAAAGGCTTGGATA
TTATCAGCAAAGGACGATTTGAATTTGACTCAATGCACGCTGTTGAGGTTGGTGCGAGTTTTATGGCAATTAAAAAACAG
ATCACCAACAGCGGACGGCAAGTGACTTATGTGGCAGACCGTTCGGAAGAGGCAAGCCACGCCGACCTTGCGTGGGCTTG
CTTGCAGGTATTTATTAATGAGCCGTTTGATGGGAAACTGGAAGAAACGACCGGCACAGTAGATTTTTTAGATGATTAG

Protein sequence :
MLKQGGFLIIAPMENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIPVSTIASWKKREKWDEISPVGRVEA
TLESRLNLLIMKESKNNNDYKEMDALRRLLESTARIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLING
FLDGMFHYQKKWHEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVAYAKRVADVEL
KGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVAAGMASQKQYRITYFSTPSSITHSAYLLWSGKL
FNRKRPKAEQVEIDISHANLKNGKKCGDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKF
TMMQRCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRLLEYRTFKGADFAEQAAEI
VAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYNVELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQ
ITNSGRQVTYVADRSEEASHADLAWACLQVFINEPFDGKLEETTGTVDFLDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4322 NP_807916.1 terminase subunit Not tested SPI-7 Protein 5e-147 55
STY4627 NP_458709.1 probable terminase subunit Not tested SPI-7 Protein 8e-148 55
unnamed ABR13464.1 predicted ATPase terminase subunit Not tested PAGI-6 Protein 2e-150 51