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Name : K748_04930 (K748_04930) Accession : YP_008336877.1 Strain : Helicobacter pylori UM298 Genome accession: NC_021882 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 975838 - 977085 bp Length : 1248 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAGCGCGATGGATGA TGAATTGGAGCGCTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAAGCTTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGTATTAAAATGGCTCAAAAAGTGGATACAAACGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTATAAAAGCGTGGGCGAATTGGAGCAACAAATAGATTTAAAGCTTTCCATAATCCCTAA TCTGGTGGATAAAAAAACCCCTTTAGGCACAAGCGAAGAAGACAATATAGAAATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCCAAAGAGCATTTTGAACTCGCTCAACAAAATGGTTGGATTGATTTTGAAAGCGGCGTGAAACTCGCT AAAAGCCGTTTTTCTGTCATTAGGGGTTTTGGGGCTAAAATTTATCGCGCGCTCATCCATTTAATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACTGGGCAATTGCCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCTCTGAAGTAACGCTCACTAATCTATAC AACGACACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG TGCGGGCAAGGATACAAGAGGGATGATAAGACAGCACCAGTTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTTATGCAAGAGCATATGCTAGAGAGCGCGAGCGCGATTTTAAAGGCTTTGGAATTGCCGCACCGGTTTGTG CAATTGTGCAGCGCGGATTTAGGTTTTAGCGCGAGCAACACGATAGATATTGAAGTGTGGCTGCCTGGGCAAAATTGCTA CAGAGAAATCAGCTCGGTGTCTAACACGAGGGATTTTCAAGCCAGGCGCGCGAAAATCCGCTTTAAAGAAAACCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCATATTCCTAAGGCGTTAGAAAAATATCTTTAA Protein sequence : MIDKKLLLQDFEMVALSLKKRNSAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEFGIKMAQKVDTNDLKKELENN KIKLNELYKSVGELEQQIDLKLSIIPNLVDKKTPLGTSEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEHMLESASAILKALELPHRFV QLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-75 | 45 |
