Gene Information

Name : K748_08040 (K748_08040)
Accession : YP_008337462.1
Strain : Helicobacter pylori UM298
Genome accession: NC_021882
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1581041 - 1581388 bp
Length : 348 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :

ATGAAATTTCTTACAAAAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGTGATAACAACCAATCCTTT
AATGGCGTTCAGCAGTCCTACAGCAGGCGTTACTGAGACTAAAACTGTGGTTGTTCAGATCATTTCTGTTCTAGCGATCG
TAGGTGGTTGCGCTCTAGGGGTCAAAGGCATAGCAGATATTTGGAAAATCTCTGATGACATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTATGCGCAGCCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTATTTGAGCACTAAGTTTGGCTTCAA
TATTGGCGAGGGTGGAGGAGCTAGCTAA

Protein sequence :

MKFLTKITDSYKKVVVTLGLVITTNPLMAFSSPTAGVTETKTVVVQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGEGGGAS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
HP0546	BAD13852.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	1e-39	94
cagC	YP_005774525.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	5e-45	94
HP0546	BAD14071.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-45	94
cagC	YP_005779047.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	5e-45	94
HP0546	BAD13798.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-45	94
cagC	YP_005777287.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	5e-46	94
HP0546	BAD13907.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	2e-45	94
cag25	AAR03908.1	Cag25	Virulence	cag PAI	Protein	2e-39	94
HP0546	BAD14017.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	5e-45	93
HP0546	BAD13989.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-44	92
cagC	AAC44704.1	CagC	Virulence	cag PAI	Protein	1e-38	92
cag25	AAR03938.1	Cag25	Virulence	cag PAI	Protein	5e-39	92
HP0546	BAD13825.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-44	92
HP0546	NP_207342.1	cag pathogenicity island protein (cag25)	Virulence	cag PAI	Protein	8e-39	92
cagC	AGC69805.1	cag pathogenicity island protein C	Virulence	cag PAI	Protein	3e-44	91
cagC	YP_005775746.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	6e-44	91
HP0546	BAD13879.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-44	91
HP0546	BAD13934.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-44	91
cagC	YP_003728718.1	cag pathogenicity island protein C	Virulence	cag PAI	Protein	1e-34	91
cagC	NP_223212.1	cag island protein	Virulence	cag PAI	Protein	8e-39	91
cag25	AAR03969.1	Cag25	Virulence	cag PAI	Protein	3e-39	91
HP0546	BAD14044.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	5e-44	90
HP0546	BAD13962.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	3e-44	90
cag25	AAR03880.1	Cag25	Virulence	cag PAI	Protein	9e-44	89

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
K748_08040	YP_008337462.1	sodium:calcium antiporter	VFG0305	Protein	2e-39	92