|
Name : pglF (A7H1H_0682) Accession : YP_008330626.1 Strain : Arcobacter butzleri 7h1h Genome accession: NC_021878 Putative virulence/resistance : Virulence Product : N-acetyl-hexosamine dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 665728 - 667470 bp Length : 1743 bp Strand : + Note : Pfam matches to PF02719.10 Polysacc_synt_2, and to PF13727.1 CoA_binding_3 DNA sequence : ATGAATTATTTAAGAGACAAGAGATTTCTTGGAATATTAGTAACTATTGTTATATCTACATTTTCTCTTTACCTAGTTGC TTTTTTAATCAACAAGAATATATCTTTGATAGCTTTAAGTACTATAATTATTACTAGAACTATTTTTTCATTTTTACTTT TTGATGACTATAAACTTTCTTGGTCCAAAGCATCTACAAAAACAGGTTTGATGAAGATTATACTTGCATTGATAAGTTTT ATGATTTATATGCCTATTCTATATTATTTTTATCATATTTCTTTTAATCTTTTATTTATCGATTTGATTTTTTATACATT TATTATAAATATTTTAGTTTATGTATATAAATATTATCACTCTGTTGGAAAAAACAAAAAAACAAAAAACTTAGTAATAT ATGGGGCAGGAAAAGCTGGACTTCAACTTCAAAGAGAGTTTTTAAGTAGCGAATACAAACTTGTTTGTTTTATAGATGAT GATGAAATATTACATCATAGAAGTATTGATGGTATTTCTATATATTCAAAAGAAAAATATTGTAGTTTGTTTGAAAATCA AAAATTTGATTTGATGATTATTGCTATGCCATCAGCTTCTCAAGAACAAATAAAAATAATTTATGAATTTATGCAAGATA AATTTGAAAAGATAAAAATTTTGCCTTCGATGAATAATATTCTAAAAAAAGAAGAGTTTACAAAACAACTTAAAGATATT GGAGTTGAAGATTTACTAGCACGTTATCCAAAAGATTTGGATAAAAAACAAATAGAAAACTTTATCAAAGACAAAATAGT TTTAATTACAGGTGCAGGTGGAAGTATAGGAAGTGAAATATCAAGACAGTGTAAAACATATGGAGCAAAACAACTAATAC TTTTAGATCATAGTGAATTTAATCTTTATTCAATTTTAGAAGAGTTAAAAGATGAAAATATAGTTCCTATTATGCAAAGT GTAAGAGATATAAAAGCTTTAGAAAGTTCTTTTGAAAAATATAAACCACAAATTGTTATTCACGCAGCAGCTTATAAACA TGTGCCTTTAGTTGAATACAATATCTTAGAAGGTATTACAAATAATATAATTGGAACAAAAAATTGTATAGATTTATCTA TAAAATATGGTGCTCAAAAGTTTGTTCTTATCTCAACAGATAAAGCAGTTCGTCCAACAAATATTATGGGAACAACAAAA CGAATTTGTGAACTTTATGCTCAGAATGTAGAGTCAAAAAATACAGAGATTGTAGCTGTTAGATTTGGGAATGTTTTAGG AAGTAGTGGAAGTGTTATTCCAAAATTCAAATCTCAAATTGAACAAGGTAAAAATATTACAGTAACTCATCCAGAAATTA CAAGATATTTTATGCTTATTCCTGAAGCTTGCGAACTTGTGCTTCAAGCAGCAAGTATTGCAAATGGTGGAGAAATATTC ATTCTTGATATGGGAGAACCAATTAAGATAGTGGATTTGGCTAAGAAAATGATTGAATTAAGTGGTAGAAGTGATATAAA TATAGAGTTTTGTGGATTAAGACTTGGTGAAAAGTTGTATGAAGAATTATTAATAAATGATAGTGATCAAAAAACAAAAT ATGAATCAATCACAGTTGCAAATTCTACGAAATTTGATATAAATGAACTAAATAAAAAAATAGAAGAGTTGTTAATTTGT GAAGATAAAGTAGCAAAATTAAAAGAGATTGTTCCAGAATTTGAGCATAGGCTAAATAACTAA Protein sequence : MNYLRDKRFLGILVTIVISTFSLYLVAFLINKNISLIALSTIIITRTIFSFLLFDDYKLSWSKASTKTGLMKIILALISF MIYMPILYYFYHISFNLLFIDLIFYTFIINILVYVYKYYHSVGKNKKTKNLVIYGAGKAGLQLQREFLSSEYKLVCFIDD DEILHHRSIDGISIYSKEKYCSLFENQKFDLMIIAMPSASQEQIKIIYEFMQDKFEKIKILPSMNNILKKEEFTKQLKDI GVEDLLARYPKDLDKKQIENFIKDKIVLITGAGGSIGSEISRQCKTYGAKQLILLDHSEFNLYSILEELKDENIVPIMQS VRDIKALESSFEKYKPQIVIHAAAYKHVPLVEYNILEGITNNIIGTKNCIDLSIKYGAQKFVLISTDKAVRPTNIMGTTK RICELYAQNVESKNTEIVAVRFGNVLGSSGSVIPKFKSQIEQGKNITVTHPEITRYFMLIPEACELVLQAASIANGGEIF ILDMGEPIKIVDLAKKMIELSGRSDINIEFCGLRLGEKLYEELLINDSDQKTKYESITVANSTKFDINELNKKIEELLIC EDKVAKLKEIVPEFEHRLNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-76 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pglF | YP_008330626.1 | N-acetyl-hexosamine dehydratase | VFG1300 | Protein | 4e-72 | 46 |
