|
Name : A7H1H_0340 (A7H1H_0340) Accession : YP_008330296.1 Strain : Arcobacter butzleri 7h1h Genome accession: NC_021878 Putative virulence/resistance : Resistance Product : ABC transporter, ATP-binding/permease protein Function : - COG functional category : - COG ID : - EC number : - Position : 335607 - 337400 bp Length : 1794 bp Strand : - Note : Pfam matches to PF00005.22 ABC_tran, and to PF00664.18 ABC_membrane DNA sequence : ATGAAAAAACAAAAAGTAGGACTTTGGGCTATTATGTCCCCAGTTAAATTCAAAATTAGATTAGCTATGTTATTAGCTAG TATTGGTGCGATAAGTTTGATTTCAAGTTTATTACTTCTTTCTCTTACCTTATCAAATATTTTAATTAACACTCCTTTGA TTATTTTTGGTATTGAATTGGATTTAATCAAAACTATACTTTTATTAGCAATTCTAACAATTATCGCTTTTGTATCAAGA TTAGCAGGATTTATAGTTTCACATTTAGGAGCTTTTCACTTAGAACAAATATTAAGAACAAACTTATCACAACATTTAGC AACCGTTCCTTTAGGATATATTATCTCAAATGGTTCAGGAACTTTAAAAAAAGTTATGCAAGATGATGTAAAAACTTTAC ATACTTTTGTTGCTGATAGTACACCAATGATTGCAAAAAGTATAATTGCCCCAATAAGCACTTTAATCATACTTTTGATT ATTGATTATAGATTTGCTCTTGCAACTCTTAGTGTATTTATTTTAGGTTGGATTACTATGGCATTTTCTATGAGAGATTC AAAAACTTTACGAATAAAATATGAAAAAAGTCAATCAAATATAAATAAAGCTGTTATTGAGTTTGCTCAAGCTATGCCAG TTGTACGAACATTTGATGATGGAACAACTTCATTTAAAAGATATAACGATGCTTTATTGGAATATAAAACAAATCTTCAA CATTGGATGAATATAAGTGCTTTTAGTGCAAAACTTGGAATGATTATTTTAAGTCCACTTCCTACACTAATTGCCGTTCT TATTACTGGTATTTATCTTTTAAATTTTGGAACTCTTGAACTATTTGCATTTATAAGTGCCCTATTTTTAAGTACAGGTA TGGCAGATGCAATGATGCCACTTATGTGGATAAATAACCATATAAAAAAATCTCAAGCATCAGCACTTAGAATTCAAGAA GTTTTAGAAATAAAATCTCTTGAAATTCCAAAAGAGACAAAATCTATAAAAAACTATGACATTGAATTTGAAAATGTCTC TTTTAAATATGATAGTGTTGAAAAATATGCTTTAAAAAATATAAGTTTCAAAGTAAAAGAAGGAAGTGTTACTGCGCTCG TTGGTCCAAGTGGTGCTGGAAAAAGTACAGTTGCAAAACTAATTCCTAGATTTTGGGATGTAACTAGTGGTGAAATAAAA ATTGGTGATCTTAATATAAAAGAACTAAGTAATGAAACTTTGATGAATACAGTCTCTTTTGTATTTCAAGATACTTTTTT ATTTCAAGATACAATTTATAATAACATCAAAATGGCAAATGAAAAAGCAACTAAAGAAGATATAGTAAATGCTTGTAAAG CTGCACAAATTCATGATTTTATAGAAAGTCTACCAGATGGTTATGAAACACTTGCAGGAGATAGAGGAACAAATCTTTCA GGTGGACAAAAACAAAGAATCACAATAGCAAGAGCAATTTTAAGAAATACTCCAATTATTGTTTTAGATGAAGCAACAGC TTTTGCAGACCCTGAAAATGAAGAAGAGATAGTAAAAGCATTGGCAAATTTAACTATAAATAAAACAGTTATTATGATAG CTCATCGTCTTTCTACTATAAAAGATTCTGATCAAATTATTGTATTTGATGAAGGAAAAATATCAGAAATTGGAAAACAT GATGAACTTTTAGAAAAACAAGGTATCTATTCAAAACTTTGGAGCAACTATGAAAAAGCTAGTTCTTGGAACCTAGAAAA AATAGAAGATAAAAAAGGAAAAAACAATGAATAA Protein sequence : MKKQKVGLWAIMSPVKFKIRLAMLLASIGAISLISSLLLLSLTLSNILINTPLIIFGIELDLIKTILLLAILTIIAFVSR LAGFIVSHLGAFHLEQILRTNLSQHLATVPLGYIISNGSGTLKKVMQDDVKTLHTFVADSTPMIAKSIIAPISTLIILLI IDYRFALATLSVFILGWITMAFSMRDSKTLRIKYEKSQSNINKAVIEFAQAMPVVRTFDDGTTSFKRYNDALLEYKTNLQ HWMNISAFSAKLGMIILSPLPTLIAVLITGIYLLNFGTLELFAFISALFLSTGMADAMMPLMWINNHIKKSQASALRIQE VLEIKSLEIPKETKSIKNYDIEFENVSFKYDSVEKYALKNISFKVKEGSVTALVGPSGAGKSTVAKLIPRFWDVTSGEIK IGDLNIKELSNETLMNTVSFVFQDTFLFQDTIYNNIKMANEKATKEDIVNACKAAQIHDFIESLPDGYETLAGDRGTNLS GGQKQRITIARAILRNTPIIVLDEATAFADPENEEEIVKALANLTINKTVIMIAHRLSTIKDSDQIIVFDEGKISEIGKH DELLEKQGIYSKLWSNYEKASSWNLEKIEDKKGKNNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtP | YP_070126.1 | lipoprotein inner membrane ABC-transporter | Virulence | HPI | Protein | 3e-115 | 48 |
| ybtP | NP_669704.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-115 | 48 |
| ybtP | NP_993009.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-115 | 48 |
| ybtP | YP_853073.1 | inner membrane ABC-transporter | Not tested | PAI IV APEC-O1 | Protein | 8e-116 | 48 |
| irp6 | YP_002346904.1 | lipoprotein inner membrane ABC transporter | Not tested | HPI | Protein | 8e-116 | 48 |
| ybtP | CAA21388.1 | - | Virulence | HPI | Protein | 8e-116 | 48 |
| irp6 | YP_001006813.1 | lipoprotein inner membrane ABC-transporter | Not tested | HPI | Protein | 4e-116 | 48 |
| irp6 | CAB46573.1 | lipoprotein inner membrane ABC-transporter, Irp6 | Virulence | HPI | Protein | 9e-116 | 48 |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-100 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A7H1H_0340 | YP_008330296.1 | ABC transporter, ATP-binding/permease protein | BAC0432 | Protein | 4e-116 | 48 |
