Gene Information

Name : A7H1H_0340 (A7H1H_0340)
Accession : YP_008330296.1
Strain : Arcobacter butzleri 7h1h
Genome accession: NC_021878
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding/permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 335607 - 337400 bp
Length : 1794 bp
Strand : -
Note : Pfam matches to PF00005.22 ABC_tran, and to PF00664.18 ABC_membrane

DNA sequence :
ATGAAAAAACAAAAAGTAGGACTTTGGGCTATTATGTCCCCAGTTAAATTCAAAATTAGATTAGCTATGTTATTAGCTAG
TATTGGTGCGATAAGTTTGATTTCAAGTTTATTACTTCTTTCTCTTACCTTATCAAATATTTTAATTAACACTCCTTTGA
TTATTTTTGGTATTGAATTGGATTTAATCAAAACTATACTTTTATTAGCAATTCTAACAATTATCGCTTTTGTATCAAGA
TTAGCAGGATTTATAGTTTCACATTTAGGAGCTTTTCACTTAGAACAAATATTAAGAACAAACTTATCACAACATTTAGC
AACCGTTCCTTTAGGATATATTATCTCAAATGGTTCAGGAACTTTAAAAAAAGTTATGCAAGATGATGTAAAAACTTTAC
ATACTTTTGTTGCTGATAGTACACCAATGATTGCAAAAAGTATAATTGCCCCAATAAGCACTTTAATCATACTTTTGATT
ATTGATTATAGATTTGCTCTTGCAACTCTTAGTGTATTTATTTTAGGTTGGATTACTATGGCATTTTCTATGAGAGATTC
AAAAACTTTACGAATAAAATATGAAAAAAGTCAATCAAATATAAATAAAGCTGTTATTGAGTTTGCTCAAGCTATGCCAG
TTGTACGAACATTTGATGATGGAACAACTTCATTTAAAAGATATAACGATGCTTTATTGGAATATAAAACAAATCTTCAA
CATTGGATGAATATAAGTGCTTTTAGTGCAAAACTTGGAATGATTATTTTAAGTCCACTTCCTACACTAATTGCCGTTCT
TATTACTGGTATTTATCTTTTAAATTTTGGAACTCTTGAACTATTTGCATTTATAAGTGCCCTATTTTTAAGTACAGGTA
TGGCAGATGCAATGATGCCACTTATGTGGATAAATAACCATATAAAAAAATCTCAAGCATCAGCACTTAGAATTCAAGAA
GTTTTAGAAATAAAATCTCTTGAAATTCCAAAAGAGACAAAATCTATAAAAAACTATGACATTGAATTTGAAAATGTCTC
TTTTAAATATGATAGTGTTGAAAAATATGCTTTAAAAAATATAAGTTTCAAAGTAAAAGAAGGAAGTGTTACTGCGCTCG
TTGGTCCAAGTGGTGCTGGAAAAAGTACAGTTGCAAAACTAATTCCTAGATTTTGGGATGTAACTAGTGGTGAAATAAAA
ATTGGTGATCTTAATATAAAAGAACTAAGTAATGAAACTTTGATGAATACAGTCTCTTTTGTATTTCAAGATACTTTTTT
ATTTCAAGATACAATTTATAATAACATCAAAATGGCAAATGAAAAAGCAACTAAAGAAGATATAGTAAATGCTTGTAAAG
CTGCACAAATTCATGATTTTATAGAAAGTCTACCAGATGGTTATGAAACACTTGCAGGAGATAGAGGAACAAATCTTTCA
GGTGGACAAAAACAAAGAATCACAATAGCAAGAGCAATTTTAAGAAATACTCCAATTATTGTTTTAGATGAAGCAACAGC
TTTTGCAGACCCTGAAAATGAAGAAGAGATAGTAAAAGCATTGGCAAATTTAACTATAAATAAAACAGTTATTATGATAG
CTCATCGTCTTTCTACTATAAAAGATTCTGATCAAATTATTGTATTTGATGAAGGAAAAATATCAGAAATTGGAAAACAT
GATGAACTTTTAGAAAAACAAGGTATCTATTCAAAACTTTGGAGCAACTATGAAAAAGCTAGTTCTTGGAACCTAGAAAA
AATAGAAGATAAAAAAGGAAAAAACAATGAATAA

Protein sequence :
MKKQKVGLWAIMSPVKFKIRLAMLLASIGAISLISSLLLLSLTLSNILINTPLIIFGIELDLIKTILLLAILTIIAFVSR
LAGFIVSHLGAFHLEQILRTNLSQHLATVPLGYIISNGSGTLKKVMQDDVKTLHTFVADSTPMIAKSIIAPISTLIILLI
IDYRFALATLSVFILGWITMAFSMRDSKTLRIKYEKSQSNINKAVIEFAQAMPVVRTFDDGTTSFKRYNDALLEYKTNLQ
HWMNISAFSAKLGMIILSPLPTLIAVLITGIYLLNFGTLELFAFISALFLSTGMADAMMPLMWINNHIKKSQASALRIQE
VLEIKSLEIPKETKSIKNYDIEFENVSFKYDSVEKYALKNISFKVKEGSVTALVGPSGAGKSTVAKLIPRFWDVTSGEIK
IGDLNIKELSNETLMNTVSFVFQDTFLFQDTIYNNIKMANEKATKEDIVNACKAAQIHDFIESLPDGYETLAGDRGTNLS
GGQKQRITIARAILRNTPIIVLDEATAFADPENEEEIVKALANLTINKTVIMIAHRLSTIKDSDQIIVFDEGKISEIGKH
DELLEKQGIYSKLWSNYEKASSWNLEKIEDKKGKNNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 1e-115 48
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 1e-115 48
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 8e-116 48
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 8e-116 48
ybtP CAA21388.1 - Virulence HPI Protein 8e-116 48
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 4e-116 48
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 9e-116 48
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 3e-115 48
smi_1698 YP_003446800.1 multidrug ABC transporter ATPase/permease Not tested The aminoglycoside resistance gene cluster Protein 1e-100 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A7H1H_0340 YP_008330296.1 ABC transporter, ATP-binding/permease protein BAC0432 Protein 4e-116 48