Gene Information

Name : glnA (A7H1H_1838)
Accession : YP_008331728.1
Strain : Arcobacter butzleri 7h1h
Genome accession: NC_021878
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 1782651 - 1784078 bp
Length : 1428 bp
Strand : -
Note : Pfam matches to PF00120.19 Gln-synt_C, and to PF03951.14 Gln-synt_N

DNA sequence :
ATGGGAAAATTTGTAAATAACACAGAAGAGTTTTTTAAATATTGTCAAGAAAATGATGTTAAATTTGTAGATTTTAGATT
TACAGATATGAAAGGTACATGGCACCATGTAACTTATAAATTTACTGCAGTTAGTGCTTCTACTTTAGATAATGGAATGC
CTTTTGATGGTTCGTCAATTGATGCTTGGCAACCAATTCACAGATCAGATATGGTGTTAAAACCAGATGTTGGTACTGCG
TTTTTAGATCCATTTACTGCAGATTCAACAATCATTGTAATTTGTGATGTTTATGATATTTATAAAGGACAAATGTATGA
AAAATGTCCTAGATCTATTGCTAAAAAAACTTTAGATTATTTAGCGCAATCAGGTGCTGGTGATGTTGCATATTTTGGAC
CAGAAAATGAGTTTTTTGTATTTGAAGATGTAAGAATAAAAGATACAATCAATGAATCATATTATAAAGTTGATAGTGAA
GATGGTGAATGGAATGATTCAACAGATTACGAAGGTGGAAATGTTGGACATAGACCAAGAGTAAAAGGTGGATATTTCCC
TGTAGCTCCAATTGATACAGGAGTTGATTTAAGAGCTGAAATGATGCAAGTTTTAGAGCAAGTTGGTTTAGAAGTTGTTT
TAGGACACCACGAAGTTGCTCAAGGACAACACGAAATTGGTATTGTATTTGGAGATTTAATTGAAGCTTCTGATAACGTA
CAAAAATTAAAATATGTAATTAAAATGGTTGCTCACTTAAATGGTAAATCAGCAACATTTATGCCAAAACCACTTTATGG
TGATAATGGAAATGGAATGCACGTACACCAATCAATTTGGAAAGATGGGAAAAATCTATTCTATAAACAAGGTGAGTATG
GAAATTTAAGTGATACTGCAAGACATTATATTGGTGGTATTTTTAAACATGCTAGAGCTGTTGCTGCATTTACAAATCCT
TCAACAAACTCTTATAAAAGATTAATTCCAGGATTTGAAGCTCCTTCAATTTTAACTTATTCTTCTCAAAATAGAAGTGC
TTCTTGTAGAATTCCTTATGGAGCAGGTGAAAAAGCAACAAGAATTGAAATGAGATTCCCAGATTCTACTTCTTGTCCTT
ATTTAGCATTTGCTGCTATGTTAATGGCTGGATTAGATGGAATTAAAAATAAATATGAGCCTGTTGGACCAATGGATGAC
GATTTATTTGAATTATCATTAGATGAAATTAGAGAAAGAGATATTCCTCAAATGCCTCATACTTTAAGAGGTTCATTAGA
AGCTTTAATTAGAGATAATGATTTCTTAAAACCAGTATTTACACAAGAGATGATTGATACTTATCAACATTATAAATTTG
AAACTCAAGTTTGGCCTTATGAAGCAAGACCTACACCATTTGAGTTTAAAACAATGTATTCTTGCTAA

Protein sequence :
MGKFVNNTEEFFKYCQENDVKFVDFRFTDMKGTWHHVTYKFTAVSASTLDNGMPFDGSSIDAWQPIHRSDMVLKPDVGTA
FLDPFTADSTIIVICDVYDIYKGQMYEKCPRSIAKKTLDYLAQSGAGDVAYFGPENEFFVFEDVRIKDTINESYYKVDSE
DGEWNDSTDYEGGNVGHRPRVKGGYFPVAPIDTGVDLRAEMMQVLEQVGLEVVLGHHEVAQGQHEIGIVFGDLIEASDNV
QKLKYVIKMVAHLNGKSATFMPKPLYGDNGNGMHVHQSIWKDGKNLFYKQGEYGNLSDTARHYIGGIFKHARAVAAFTNP
STNSYKRLIPGFEAPSILTYSSQNRSASCRIPYGAGEKATRIEMRFPDSTSCPYLAFAAMLMAGLDGIKNKYEPVGPMDD
DLFELSLDEIRERDIPQMPHTLRGSLEALIRDNDFLKPVFTQEMIDTYQHYKFETQVWPYEARPTPFEFKTMYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-146 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_008331728.1 glutamine synthetase VFG1399 Protein 2e-96 49