Gene Information

Name : BDL_5986 (BDL_5986)
Accession : YP_008329749.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : ATPase FliI/YscN family protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 3095400 - 3096707 bp
Length : 1308 bp
Strand : +
Note : fliI_yscN: ATPase FliI/YscN family protein

DNA sequence :
GTGATTCTGTCCGCGTTGCGAAATCTGGAACTGGATTCGGTGCCGGTCGCCCGCATGACGGGCCGCCTGACCGGCGTGAC
GGGGCTGCTGCTCAAAGCGTCCGGTTGCCGGCTCGAAACCGGCGAGCGTTGCGTGATCGAATCGGCGGACGGAGACAGGA
TCGATGCGCAGGTGGTGGGCTTCAATCGCGAGGAGACCTTTCTGATGCCGTTCAAGAAGCCGGTCGGTCTCGTCGCGGGC
GCGCAGGTGCTGTCGTGCGAGCGGCAGGGCTTGCTGCGGATCGGTCGCTCGTGGCTCGGGCGGATCGTCAACGGCCTCGG
CGAGGCCATCGACGGCCGCGGCTCGCTCGGCGGCGATGCGGTGCTCAGGGCGCATCCCGCGCCGGTGAATCCGCTGCGCA
AGCGCCCGGTGCGCGACGTGCTGGACGTCGGCGTGCGTGCGATCAACGGCCTGCTGACGCTCGGCCGAGGGCAACGTATC
GGTCTGATGGCGGGCAGCGGCGTCGGCAAAAGCATGTTGCTCGGCATGATTACGCGCGCGACGCAGGCCGATGTCGTCGT
CGTAGGGCTGATCGGCGAGCGCGGACGCGAAGTGCGCGAATTCGTCGACCACGCGCTCGGCGAAGCCGGCCTCGCGAAAT
CTGTGCTGGTGGCCGCGCCGGCCGATGAGTCGCCGCTGATGCGCCTCAAGGCGGCGGAGCTCTGCCATGCGATCGCCGCT
CATTTTCGCGATACGGGCGCGAATGTCCTGCTGCTCGTGGATTCGCTGACGCGCTATGCGATGGCGCAGCGCGAGATCGC
GCTGTCGGTCGGCGAGCCGCCGGCCACGCGCGGCTATCCGCCGTCGGTGTTCGGCATGCTGCCGCAGCTTGTCGAGACGG
CGGGCAATGGCGAGGGCGCGGGCAGCATGAGCGCGATCTACACGGTTCTCGCCGAAGGAGACGACCAGAACGATCCCGTC
GTCGATACCGCGCGCGCGATTCTCGACGGGCACATCGTGCTCACGCGTGAGCTGGCCGAGCGCGGGCACTACCCGGCGAT
CGACGTGCCGCGTTCGGTCAGCCGGTGCATGAGTCAGGTTGCCGGCGCCGAGCACGGGGCGCTCGCGCGCAAGGTCAAGG
AAATGATCGGCCGCCACGAGCAGATTCGCGATCTGATTGCGTTGGGCGGATACGTGCAGGGCGCTGATCCGGCGACGGAC
GAGGCGGTGGCGAAGGCGGCGCGCATCGACACCTTCCTGCGCCAGGACATGCTCGACGTCGCGCGTCACGACGCCACGCT
GGCGGCATTGAAGGAGCTGATCGCATGA

Protein sequence :
MILSALRNLELDSVPVARMTGRLTGVTGLLLKASGCRLETGERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAG
AQVLSCERQGLLRIGRSWLGRIVNGLGEAIDGRGSLGGDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRGQRI
GLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCHAIAA
HFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVETAGNGEGAGSMSAIYTVLAEGDDQNDPV
VDTARAILDGHIVLTRELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGADPATD
EAVAKAARIDTFLRQDMLDVARHDATLAALKELIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-85 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-85 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-83 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-72 46
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-68 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-66 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-66 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-70 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 6e-70 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 6e-70 46
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-70 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-70 46
escN AAK26715.1 EscN Virulence LEE Protein 7e-70 46
escN AAL57542.1 EscN Virulence LEE Protein 7e-70 46
escN AAC31513.1 L0034 Virulence LEE Protein 5e-70 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 5e-70 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-69 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-69 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-84 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-84 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-84 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-83 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-84 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-84 45
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-74 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-67 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-68 45
escN AAC38383.1 EscN Virulence LEE Protein 7e-70 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-66 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 3e-64 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 3e-64 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 5e-68 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-68 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-68 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 6e-66 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-61 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-68 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-68 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-71 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-67 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-67 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-67 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-65 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 9e-56 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-60 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-60 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-60 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG1254 Protein 9e-103 55
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG2499 Protein 4e-99 54
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG2331 Protein 3e-94 51
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0812 Protein 3e-70 46
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0048 Protein 6e-84 45
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0730 Protein 4e-70 45
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0192 Protein 5e-74 45
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0515 Protein 3e-68 44
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG2144 Protein 4e-79 43
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0390 Protein 4e-76 43
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG1778 Protein 5e-64 42
BDL_5986 YP_008329749.1 ATPase FliI/YscN family protein VFG0555 Protein 8e-61 41