Gene Information

Name : hcp1 (BDL_5935)
Accession : YP_008329698.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : protein hcp1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3029190 - 3029672 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :

ATGTCGCACGACATTTTCCTCAAGATCAACGGTATCGATGGCGAGGCGGAAGACGCAACCCACAAGGGCGAAATCGAGGT
CTTGAGCTGGTCGTGGAACGTCAGTCAGCAATCGAACATGCACCTGGGTTCGGGGGGCGGCGCGGGCAAGGCGACGATCG
ATGATCTGCAGTTCGAACATTACATCGATCGCGCGAGCCCGAATCTCGTTCAATACTGCTTGCTCGGCAAGCATATCGAC
GAAGCCCGGCTCGTGGTGCGTAAGGCGGGCGGCAGCCCGCTCGAATACATCAAGCTCACGATGAGCGATGTGCTCGTTAC
GCAGGTGAGCCCGGCAGGCGTGGCTCAGGACGAATCGCGCCCGCGTGAGCTCGTTCGGCTGTCGTTCTCGCGCCTGAAGC
AAGAGTATGTCGTCCAGAACCCGCAGGGCGGCAGCGGCGGCGCAATCACCGCGACTTTCGACATCAAGAAGAACGCGGCG
TAA

Protein sequence :

MSHDIFLKINGIDGEAEDATHKGEIEVLSWSWNVSQQSNMHLGSGGGAGKATIDDLQFEHYIDRASPNLVQYCLLGKHID
EARLVVRKAGGSPLEYIKLTMSDVLVTQVSPAGVAQDESRPRELVRLSFSRLKQEYVVQNPQGGSGGAITATFDIKKNAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-47	64

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
hcp1	YP_008329698.1	protein hcp1	VFG2071	Protein	3e-24	43