Gene Information

Name : BDL_5928 (BDL_5928)
Accession : YP_008329691.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3019969 - 3020706 bp
Length : 738 bp
Strand : +
Note : pili assembly chaperone PapD, C-terminal domain protein

DNA sequence : 
GTGCGGTTATGGAAAATGTGCGTCGCCGCGGCGGCGGCGTGTTGTCTGGCTTCGACCTTGTCCCAGGCGGCGATCGTCAT
CACCGGAACCCGCGTCGTCTATCCGGAAAGCAGTCGCGAGGTCAACGTTCGGCTCAACAACGTCGAGCAGTCGCCGGTAT
TGGTGCAGGCGTGGATCGATGACGGAAATGCGGGCGCGAGCCCGGACGAGATCAAGGTGCCGTTCGTTCTCATGCCGCCC
GTGTTTCGCGTCGAACCGAAGAAGGGGCAAACGCTGCGCGTCATGTATACGGGCGACGATCTGCCGAAGGACCGCGAATC
CGTGTACTGGCTGAACGTCCTGGAGATTCCTCCAAAGCCGACCGTCGAAGCCGAGCAGAACCTCTTGCAGCTCGCGTTCC
GCACGCGCATCAAACTGTTTTTCCGTCCGTCTGCGTTGGAGGACGGAAACGCGGCGCAGGCGCGCGATCAGCTCAAATGG
AAGATCGTGCGCAACGAAAAGGGCGTGAGCGTGCTGCGTGCGGAGAATCGTTCTCCTTATTACATCTCGATAAGCCAGGC
GACCGCGAAAAGCGGCGACAAGAGCGTGCAGTTCGATCCGGGCATGGTCCCTCCGTTCGGCAGCAAGGAATTCGTGAGCA
AGCATGACATCTCGACGCTGTCCACGCATGCCGAGATTGCCTACAAGCTGCTCAATGACTATGGGGCGGAAGTGGCGGGC
TCGGCAACCGCGGAATAA

Protein sequence : 
MRLWKMCVAAAAACCLASTLSQAAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPP
VFRVEPKKGQTLRVMYTGDDLPKDRESVYWLNVLEIPPKPTVEAEQNLLQLAFRTRIKLFFRPSALEDGNAAQARDQLKW
KIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDPGMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAG
SATAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 7e-46 46
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-39 41
cupD2 AAP84170.1 putative pili assembly chaperone Not tested PAPI-1 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDL_5928 YP_008329691.1 hypothetical protein VFG0007 Protein 3e-38 44
BDL_5928 YP_008329691.1 hypothetical protein VFG1145 Protein 4e-35 42
BDL_5928 YP_008329691.1 hypothetical protein VFG1468 Protein 1e-39 41