Gene Information

Name : BDL_5150 (BDL_5150)
Accession : YP_008328919.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2099996 - 2101468 bp
Length : 1473 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGGAACCTACGTGACGGACCAACAGGTCCGACTCTTTATGAGCAAGCGCAAACATCACACTCAAGAAGTCGCCGC
GGCCATGGCGGGAATCAGCGTTCGCACGGCCCGGCGCATCGAGCATGACGGGCGTCTGCCGTCGCAGAAGCCGCCACGCA
CTTGGCGCACGCGAATCGATCCTTTCGCCGACGTATGGGATAGCGAGGTCGTGCCGTTATTACGCCATGCCCCTCAGTTG
AAGGCCATCACGCTGCTGGGCAAGCTGCAGGAAGCGCATCCTGGCCTCTTTCCTGACAGCATGCGGCGCACGCTCGAGCG
GCGCGTCAACCAATGGCGCGCGCTCGAGGGTCCCGGCAAGGAGATCTTCTTCCCGCAGCAGCACTTGCCCGGCGTGCAAG
GACTCTCGGACTTCACCGACATGCGAGATGTGCAGGTGACGATCGCCGGCGCGCCCCTTGATCACCGGCTCTATCACTTT
GTGCTCGCGTTCTCGCACTGGGAATACGCCTATGTCGTCGAAGGCGGCGAGAGCTTCGAGGCACTGTCCACCGGTCTGCA
GAACGCGCTGTGGCAGGCCGGCGGCTGCCCGCACGAGCATCGCACGGACAGCCTGTCGGCAGCGTTCAAGAATTTGCAGA
CCGAAGAGGACTTCACGGCTCGCTATGACGCGCTGTTGCTGCATTACGGCATGGCCGGCACACGCAACAACGTCGGCGTG
GCCCACGAGAACGGCAGCGTGGAGTCCTCGCACCGCCATCTGAAGGAGGCGGTCGATCAAGCGCTGATGCTGCGTGGCCA
TCGCGACTTTGAGGATCGTGAAGCCTATGAAGCGTTTGTTCGTGATGTCGTCATGCGACGTAACCGCCGCAACGCGGCTG
CGTTCAACGCCGAACGCGAACATCTGCGGGATCTGCCCGCGCATCGCACGACCGACTTCATCGAAGAGGAAGCACGTGTG
ACACGCTGCGGCACCTTCACGGTACGCGGCATTCTCTACAGCGCGCCGTCCCGCCTGATCAGCCACCGTCTGAAGGTCCG
TGTCTACGCCGATTACCTCGACTGCTATCTATCTGGCGCGCTCGTGCATAGCACCGCGCGGGGCTCCCATGCCGCCAACA
GCCGCCGTCGCAAACTCGACTACCGGCACTTCATCGAGGCGCTCAAGCGCAAGCCCCAGGCGTTCAAGGGACTGGCGTTC
CGCTACGACTTGTTCCCGCGTGAGGCGTTCGGCGCGGTGCGGCCCCACCATGCATACCTGTTCGCCAACCGGCATTCGAC
GCGAATGAAGGTGCTGGTCTACGACGGTTTGGGCGTATGGCTCGCCGCGCGTCGTCTGAATAAGGGGCGATTCGTTTGGA
CCAACGGTGAGCAGGCGATCGCGCTGCCGCTGAATCCGGAGCAGCTGCGCGCGTTGGTGGCTGGATTGCCATGGCGAACG
CTCACGCCGGACCATGCGATCACCGTCCTATGA

Protein sequence :
MPGTYVTDQQVRLFMSKRKHHTQEVAAAMAGISVRTARRIEHDGRLPSQKPPRTWRTRIDPFADVWDSEVVPLLRHAPQL
KAITLLGKLQEAHPGLFPDSMRRTLERRVNQWRALEGPGKEIFFPQQHLPGVQGLSDFTDMRDVQVTIAGAPLDHRLYHF
VLAFSHWEYAYVVEGGESFEALSTGLQNALWQAGGCPHEHRTDSLSAAFKNLQTEEDFTARYDALLLHYGMAGTRNNVGV
AHENGSVESSHRHLKEAVDQALMLRGHRDFEDREAYEAFVRDVVMRRNRRNAAAFNAEREHLRDLPAHRTTDFIEEEARV
TRCGTFTVRGILYSAPSRLISHRLKVRVYADYLDCYLSGALVHSTARGSHAANSRRRKLDYRHFIEALKRKPQAFKGLAF
RYDLFPREAFGAVRPHHAYLFANRHSTRMKVLVYDGLGVWLAARRLNKGRFVWTNGEQAIALPLNPEQLRALVAGLPWRT
LTPDHAITVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-85 48
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-85 48
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 2e-84 48
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 7e-84 48
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 2e-84 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDL_5150 YP_008328919.1 integrase core domain protein VFG1728 Protein 1e-85 48