Gene Information

Name : BDL_5112 (BDL_5112)
Accession : YP_008328889.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2048287 - 2049009 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGCGCATCAAGGAGATCACGGAAGTGCGGGTGCATTACGGTGCGCCGCGCGTGTACGTGATGCTTCGCCGGGAAGGCTG
GAGGGACAACCATAAGAGAGTGGAGCGCGTGTATCGCGAACTGGGCCTTTCGTTGCGCCACAAGCGAGCCCGGCGAAACA
AATCGGCCCGGCGCCGCCAGCCAAAGCAGTCAGTGAGCGCAATCAACGAAATCTGGAGCCTGGACTTCGTCGCCGATGCA
CTTTTTGATGGTCGACGCTTGCGCACGCTCACGATCGTGGACAACTACACGCGGGAATGCTTGGCGATCGAAGTCGATGG
TTCGTTGCGTGGCGAACACGTTCTCGCCGCGCTGGCTCGGCTTGCGCATCATCGTCCGCTTTCCCGCTCTATCAAGGCAG
ATAATGGCAGCGAGTTCATTTCGAAGGCGCTCGACAAATGGGCGTACGAGAATGGCGTGGAGATTGACTTCTCGCGTCCT
GGCAAGCCGACCGACAACGCAAAGAATGAATCCTTCAACGGACGCTTCCGGGAGGAATGCCTCAACGCGCATTGGTTCTT
GTCGCTGGAGGACGCCAGACGCAAAATCGAGGTCTGGCGCGAGTACTATAACGAGGCGCGCCCTCACTCTGCGCTACAGT
GGATGACACCGGCGGAATTCGCCCGCCAGTGTACCGATCGGGCCGGTTCGGCCCGCCCTGAAGAGCCGGAATTTTCCAAC
TAA

Protein sequence :
MRIKEITEVRVHYGAPRVYVMLRREGWRDNHKRVERVYRELGLSLRHKRARRNKSARRRQPKQSVSAINEIWSLDFVADA
LFDGRRLRTLTIVDNYTRECLAIEVDGSLRGEHVLAALARLAHHRPLSRSIKADNGSEFISKALDKWAYENGVEIDFSRP
GKPTDNAKNESFNGRFREECLNAHWFLSLEDARRKIEVWREYYNEARPHSALQWMTPAEFARQCTDRAGSARPEEPEFSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-58 65
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 6e-35 50
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-39 48
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 1e-24 45
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 4e-29 42