Gene Information

Name : epaP (BDL_4846)
Accession : YP_008328623.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein, YscR/HrcR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1700806 - 1701486 bp
Length : 681 bp
Strand : -
Note : yscR: type III secretion apparatus protein, YscR/HrcR family

DNA sequence : 
ATGGCGAATAACGAAATCGCGCTGATCGTCCTGCTGACGGCGGCCACGCTCGTGCCGTTCGTCGTCGCGGCGGGCTCGTG
CTTCATCAAGTTCTCGATCGTGCTCGTGCTCGTGCGCAACGCGCTCGGCATCCAGCAGGTGCCGTCGAATCTCGCGCTCA
ACAGCATCGCGCTCATCATGTCGCTGTTCGTGATGATGCCCGTCGCGCAGAGCGCGTACCGATATCTGCAGCACCACCCG
CTCGACGTGATGAGCGGCGCGTCGGTCAACGAGTTCATCGACGGCGGGCTCGGCGATTACAAGCGCTATCTGGCGCGCTA
CTCGGACCCGGAACTCGTGCGCTTCTTCGAGCGCGCGCAGACCGCGCGCCTGAAGGGCGACGACGCCGACGCCGCCGATG
CGGACGACGCGCCCGACGGCCTCGACAATTCGCTGTTCTCGCTGCTGCCCGCGTATGCGCTCACCGAGATCAAGAGCGCG
TTCAAGATCGGCTTCTACCTGTACCTGCCGTTTCTCGTCGTCGACATGGTGGTGTCGAGCGTGCTGCTCGCGCTCGGGAT
GATGATGATGAGCCCGGTGACGATCTCGGTGCCGATCAAGCTGATCCTGTTCGTCGCGATGGACGGCTGGACGCTGATCT
GCAAGGGCCTGATCGAGCAGTACCTGAACCTGATGCAATGA

Protein sequence : 
MANNEIALIVLLTAATLVPFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQHHP
LDVMSGASVNEFIDGGLGDYKRYLARYSDPELVRFFERAQTARLKGDDADAADADDAPDGLDNSLFSLLPAYALTEIKSA
FKIGFYLYLPFLVVDMVVSSVLLALGMMMMSPVTISVPIKLILFVAMDGWTLICKGLIEQYLNLMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaP NP_311752.1 surface presentation of antigens protein SpaP Not tested LIM Protein 7e-53 62
epaP AAZ31293.1 EpaP Virulence ETT2 Protein 2e-51 61
spaP NP_457284.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-50 60
spaP NP_806493.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 1e-50 60
spaP YP_217809.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 2e-50 60
spaP NP_461811.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 2e-50 60
ysaR AAS66846.1 YsaR Not tested SSR-1 Protein 2e-49 60
spaP AAS66865.1 SpaP Not tested SSR-2 Protein 7e-52 57
escR CAC81847.1 EscR protein Virulence LEE II Protein 1e-30 42
escR CAI43889.1 EscR protein Virulence LEE Protein 1e-30 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 42
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-30 42
escR AAK26700.1 EscR Virulence LEE Protein 1e-30 42
escR AAL57527.1 EscR Virulence LEE Protein 1e-30 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-30 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-30 41
escR AAC38369.1 EscR Virulence LEE Protein 6e-30 41
escR AAC31528.1 L0049 Virulence LEE Protein 1e-30 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 1e-30 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG2455 Protein 6e-83 99
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG1773 Protein 3e-56 63
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG1012 Protein 2e-51 60
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG0551 Protein 6e-51 60
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG0394 Protein 4e-32 43
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG0188 Protein 2e-32 41
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG0715 Protein 3e-30 41
epaP YP_008328623.1 type III secretion apparatus protein, YscR/HrcR family VFG0827 Protein 6e-31 41