Gene Information

Name : epaR (BDL_4844)
Accession : YP_008328621.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1699725 - 1700480 bp
Length : 756 bp
Strand : -
Note : fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT

DNA sequence :
ATGGATGTCTTGATGCAAGCGTTCTACCGGCACGCCGGCGCGATCGCGATCGCGTACGCGCGCGTCGCGCCGGTGTTCTA
TCTGCTGCCGTTCCTGAACGACCGGACGATCGTCAACGGCATCGTGAAGAACACGATCGTGTTCGCGATCATCCTCGGGC
TGTGGCCGAGCTTCGCGCATCCGCCGCTGCAAGGCGGCGCGCTCGCCGGCGTCGCGCTGACGGAGACGGCCGCGGGCGTC
GTGCTCGGCGTCGCGCTGTCGCTGCCGTTCTGGGTCGCGACGGCGGTGGGCGAGCTGATCGACAACCAGCGCGGCGCGAC
GATCAGCGATTCGATCGACCCGGCGACGGGCGTCGAAGCGTCGGCGCTCGCGCCGTTCGTGAGCCTGTTCTACGCGGCCG
CGTTCCTGCAGCAGGGCGGGATGCTGACGATCGTCGGCGCGCTCGAGGCGAGCTACGCGACGGTGCCCGCCGGCGCGCTG
TTTTCGGTCGATCTGCCGCGCATCGGCGCGCTGTTGACCGATCTCGTCGCGCACGGGCTCGCGCTCGCCGCGCCCGTGCT
GATCGTGATGTTCGTCACCGATGCGCTGCTCGGGCTGTTCTCGCGCTTCTGCCCGCAGGTCAACGCGTTCTCGCTGTCGC
TGACGGTCAAGAGCATCGTCGCGTTCGCCGTGTTTCACCTGTACTTCGTATACGCGGCGCCGCACGAGCTGACGGCGCTG
CTGCGCGTGCATCCTTTCAGCAGCCTGGTGAAGTGA

Protein sequence :
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAHPPLQGGALAGVALTETAAGV
VLGVALSLPFWVATAVGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGAL
FSVDLPRIGALLTDLVAHGLALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
LRVHPFSSLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 4e-30 44
ysaT AAS66848.1 YsaT Not tested SSR-1 Protein 6e-41 43
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-30 43
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 3e-30 43
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 8e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_008328621.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG2453 Protein 5e-102 99
epaR YP_008328621.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1771 Protein 3e-42 48
epaR YP_008328621.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 2e-30 44
epaR YP_008328621.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1014 Protein 4e-30 43