Gene Information

Name : spaS (BDL_4843)
Accession : YP_008328620.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein spaS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1698486 - 1699721 bp
Length : 1236 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGAGAAAACCGAGAAGCCGACCGCGAAGAAGCTGCGCGACGCGGCGAAGAAGGGGCAGACGTTCAAGGCGCGGGA
CATCGTCGCGCTCATCGTGATCGCCACGGGCGCGCTGGCCGCGCCCGCGCTCGTCGATCTGACGCGCATCGCGGCCGAAT
TCGTGCGGATCGCGTCGACGGGCGCGCAGCCGAACCCGGGTGCGTACGCATTCGCGTGGGCGAAGCTGTTCCTGCGCATC
GCCGCGCCGTTCGTGCTGCTCTGCGCGGCGGCGGGCGCGCTGCCGTCGCTTGTGCAAAGCCGCTTCACGCTCGCGGTCGA
ATCGATCCGCTTCGATCTCACCGCGCTCGATCCGGTCAAGGGAATGAAGCGGCTCTTCAGCTGGCGCTCGGCGAAGGACG
CGGTGAAGGCGCTGCTCTATGTCGGCGTGTTCGCGCTCACGGTGCGCGTGTTCGCCGGTCTCTACCACGCCGACGTGTTC
GGGCTGTTCCGCGCGCGCCCGGCGCTGCTCGGCCACATGTGGATCGTGCTCACGGTGCGCCTCGTGCTGCTGTTCCTGCT
GTGCGCACTGCCCGTGCTGATCCTCGACGCCGCCGTCGAATACTTCCTGTACCACCGCGAACTGAAGATGGACAAGCACG
AGGTGAAGCAGGAATACAAGGAGAGCGAGGGCAATCACGAGATCAAGAGCAAGCGGCGCGAGATTCATCAGGAACTGCTG
TCGGAGGAGATCAAGGCGAACGTCGAGCAGTCCGATTTCATCGTCGCGAACCCGACCCACATCGCGATCGGCGTCTACGT
GAATCCGGACATCGTGCCGATTCCGTTCGTGTCGGTGCGCGAGACCAACGCACGCGCGCTCGCCGTCATTCGGCATGCCG
AAGCGTGCGGCGTGCCCGTCGTGCGCAACGTCGCGCTCGCGCGCTCGATCTATCGCAACTCGCCGCGCCGCTACAGCTTC
GTGAGCCACGACGACATCGACGGCGTGATGCGCGTGCTGATCTGGCTCGGCGAGGTCGAGGCGGCCAATCGCGGCGGGCC
GCCGCCCGAGACGCGCGCGCCGACTTCGGCCGAGCCGCAAGCGCGCGACGGCGTGGCCCCGCCGGGCGACGCCTGCGCGG
ACAACGCCTTTCCCGACGACGCCCCACCGGGCGCCGCTGCGCCGAACGCCGGTTCGCCGGACGGCCCGGCGCCGGACGGC
GGCGCGCCGGCCCGAACGGGCGATCAAAACGCTTGA

Protein sequence :
MAEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPALVDLTRIAAEFVRIASTGAQPNPGAYAFAWAKLFLRI
AAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALDPVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVF
GLFRARPALLGHMWIVLTVRLVLLFLLCALPVLILDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQELL
SEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACGVPVVRNVALARSIYRNSPRRYSF
VSHDDIDGVMRVLIWLGEVEAANRGGPPPETRAPTSAEPQARDGVAPPGDACADNAFPDDAPPGAAAPNAGSPDGPAPDG
GAPARTGDQNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaS NP_806490.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 1e-63 46
spaS YP_217806.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 1e-62 46
spaS NP_461808.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 1e-63 46
spaS NP_457281.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-63 46
spaS AAS66868.1 SpaS Not tested SSR-2 Protein 5e-55 44
ECs3721 NP_311748.1 surface presentation of antigens protein SpaS Not tested LIM Protein 9e-63 43
ysaU AAS66849.1 YsaU Not tested SSR-1 Protein 4e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaS YP_008328620.1 surface presentation of antigens protein spaS VFG2452 Protein 7e-161 99
spaS YP_008328620.1 surface presentation of antigens protein spaS VFG0548 Protein 5e-64 46
spaS YP_008328620.1 surface presentation of antigens protein spaS VFG1770 Protein 2e-58 42
spaS YP_008328620.1 surface presentation of antigens protein spaS VFG1015 Protein 1e-57 41