Gene Information

Name : N134_04660 (N134_04660)
Accession : YP_008326236.1
Strain : Lactobacillus reuteri TD1
Genome accession: NC_021872
Putative virulence/resistance : Unknown
Product : transposase IS200
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 985664 - 986122 bp
Length : 459 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCTAATAAATTAAATAGCTTAGCCCATACGAAGTGGTTATGTAAGTATCACATCGTATTCATACCAAAGTATAGACG
TAAAGCGATTTTCAATCAATACCGAAGAGACCTAAGAGATTATATTCGTTTGTTGTGCAAATATAAGGGAGTAGAAATAA
TTGAAGGTCATATGATGCCAGATCATGTGCACTTGTTAGTAAGTATTCCGCCGAAACTAAGCGTATCACAGTTTATGGGA
TACTTAAAAGGGAAAAGTGCATTAATGATGTTTGATCGACATGCAAACTTAAAATACAAATATGGGAACCGACATTTTTG
GGCTGAAGGCTACTATGTGAGTACAGTTGGATTGAATGAATCCACGATAAAGAAGTATATCCGAGATCAAGAGAAACATG
ATATAGCAATGGATAAGCTAACAAGTGTGGAATATTCGGACCCTTTTAAGGGTAAGTGA

Protein sequence :
MANKLNSLAHTKWLCKYHIVFIPKYRRKAIFNQYRRDLRDYIRLLCKYKGVEIIEGHMMPDHVHLLVSIPPKLSVSQFMG
YLKGKSALMMFDRHANLKYKYGNRHFWAEGYYVSTVGLNESTIKKYIRDQEKHDIAMDKLTSVEYSDPFKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 1e-36 64
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 2e-36 64
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 1e-37 59
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 4e-36 58
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 9e-33 52