Gene Information

Name : N134_04300 (N134_04300)
Accession : YP_008326165.1
Strain : Lactobacillus reuteri TD1
Genome accession: NC_021872
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 907063 - 908040 bp
Length : 978 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTGCACATCAGTAATTTATACAGCAGGTGATTATTACTTTGGCCGTAACCTTGATTTGGAAGTCAACCTTGGTCAAGA
AGTAGTGATTACCCCACGTAATAAGACTTTAGAATTTCGGAAAATGCCAAACCTTGAACACCATTATGCGATTATTGGAA
TGTCGATTGTTCGTGATGATTATCCATTATATTTTGATGGGGTAAATGAAAAGGGTGTTGGAATGGCAGGCCTTAATTTT
GATGGTCCAGCTCATTATTTCCCAGTCCAAGAAGGAAAAGATAATATTGCATCATTTGAATTAGTTCCTTATATTCTTGC
GGCTGCTTCCTCGGTTGCTGAAGCGAAGAAGTTACTTTCAAATGTAAACATTGCTAATATCAATTTTTCTGATAAACTCC
AAGCTGCACCGCTGCACTGGATTATTGCTGATAAAACGGGTGCTTCTGTGACTGTTGAATCCACCGCAAAAGGATTGAAT
GTTTATGATAACCCAGTTGGTGTTTTGACAAATAATCCAGAGTTTCCTCGTCAATTATTAAATCTTAGTAACTATCGTAG
TGTTGCACCTGCTAATCCGGCTAACGTATTTGCACCTAATGTCGACCTACCAGTTTATAGCCGGGGCTTAGGGACCCATT
TTCTCCCGGGAGGAATGGATTCTGAAAGTCGTTTTGTTAAGGCTACTTTCACTAAGATGCATGCCCCAGTTGGTAATTCT
GAAGTTGAGAATATTACCAACTATTTCCACATTCTTCAATCTGTCGAACAACAAAAGGGTTTGGATGAAGTAGCACCGAA
TACTTTTGAATATACGATCTACTCTGATGGTTCAAACCTAAAGAAGGGCATTTTTTACTACAAGACTTACGAAAACAGTC
AAATTAATGCAGTTGATATGCATAAGGAAGACCTTGAAGCATCAGAATTAATTACCTATCCAGTTCAAAATAAACAAATT
ATTAACCAACAAAATTAA

Protein sequence : 
MCTSVIYTAGDYYFGRNLDLEVNLGQEVVITPRNKTLEFRKMPNLEHHYAIIGMSIVRDDYPLYFDGVNEKGVGMAGLNF
DGPAHYFPVQEGKDNIASFELVPYILAAASSVAEAKKLLSNVNIANINFSDKLQAAPLHWIIADKTGASVTVESTAKGLN
VYDNPVGVLTNNPEFPRQLLNLSNYRSVAPANPANVFAPNVDLPVYSRGLGTHFLPGGMDSESRFVKATFTKMHAPVGNS
EVENITNYFHILQSVEQQKGLDEVAPNTFEYTIYSDGSNLKKGIFYYKTYENSQINAVDMHKEDLEASELITYPVQNKQI
INQQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 8e-83 57
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 1e-82 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N134_04300 YP_008326165.1 choloylglycine hydrolase VFG2162 Protein 9e-84 55