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Name : N134_00265 (N134_00265) Accession : YP_008325417.1 Strain : Lactobacillus reuteri TD1 Genome accession: NC_021872 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 50751 - 52988 bp Length : 2238 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGCTCAAAACCCAATGAATCCATTTGACAACGACATGAATGACATCTTTAATCAATTAATGGGTGGCATGAATGGTTT CAATTCTGATAATCGGCGTTACCTAATCAATGGTCGTGAAGTAACACCAGAAGAATTTGCTGAATATCGTAGAACTGGTC AATTGCCAGGCGGTGCAAATCCTCAACAAGGTGGGCAACCTGGCCCTCAACCTAACGCAGGTAAGGACAGTATCTTACAC AAGTTAGGTCGAAACTTAACTCAAGAAGCTCGTGAACATGAACTTGACCCTGTTATTGGTCGGAACAAGGAAATCCAAGA AACAGCTGAAATTTTAAGCCGGCGGACAAAGAACAACCCTGTATTAGTTGGGGACGCTGGTGTTGGTAAGACTGCTGTTG TTGAAGGATTAGCACAAGCAATTGTTTCCGGCGATGTACCAGCTGCTATCAAGGACAAGGAAATTATCAGTATCGATATT TCTGGCCTTGAAGCAGGTACTCAATACCGTGGTAGCTTTGAAGAAAACATGCAAAAGTTGGTTGATGAAGTCAAGAAGGC TGGAAACATCATCCTCTTCTTCGATGAAATTCACCAAATTATCGGTGCCGGTTCAACTGGTGATTCTAGTGGTTCTAAGG GTATGTCTGACATTATTAAGCCAGCATTATCTCGTGGTGAACTAACAGTTATCGGTGCAACTACTCAAGATGAATACCGG AACACTATTATGAAGGATGCTGCATTAGCACGGCGGTTCAATGCTGTTACTGTTAATGCTCCAAGCAAGGCTGATACAGT GGCCATCCTTAAAGGTATCCGTGACTTGTACGAACGTCACCACAATGTAAAGTTACCAGATGACGTTCTCCAAGCTGCTG TTGATTACTCTGTTCAATACATGCCACAACGTGCATTACCTGACAAGGCTATCGACTTAATCGATATGACTGCTGCTCAC TTAGCAGCAAAGCACCCTGCACGTGATGCTAAGGCAATTGAAAAAGATATCGAAGCAGAAGAAAAGAAGCAAAAAGCGGC TGCTAAGAAAGAAGATTACAAGGCTGCCCAAGATGCCAAGGAAAAGATTGCTGACTTGAAGAAGCAATTGAGTGAAAACT CTGAATCTGAAAAGGTTACTGCTACTCCAGAAGACGTTGCTAAGGCTGTAGAACAAATGACTGGTATTCCAGTTTCCAAG ATTGGTGCTAGTGATGTTGAACGCTTAAAGGACATGGACAAGCGGCTTGAAGGCAAGGTTATTGGCCAAGACAAAGCTGT TGAAGCAGTTGCTCGTGCTATTCGTCGTAATCGTGCTGGATTTGACGAAGGCGATTCACCAATTGGTAGTTTCCTCTTCG TTGGACCTACTGGTGTTGGTAAGACTGAACTTGCTAAGCAACTAGCCCTTGATATGTTTGGTAGCAAGGATGACATTATT CGGTTAGATATGTCTGAATACTCTGACCGGACAGCCGTATCTAAGATGATCGGTGCTACTGCTGGTTATGTTGGTTACGA AGACAACGGTAATACCTTGACTGAAAAGGTTCGTCGTCACCCTTATTCAATTATTCTTCTTGATGAAATTGAAAAGGCTA ATCCACAAGTTATCACCCTCTTGCTTCAAGTACTTGATGATGGTCGCTTAACTGATGGACAAGGTAACACTATTGACTTT AAGAATACTGTTATTATTGCTACATCAAATGCCGGCTACTCCAACGATGCTCCAGTTAAGATGGGCCGGAACGAAGATGA AGAAGACTTAATTAAGAAGTTGACTACTTACTTCCGTCCTGAATTCTTGAACCGGTTCAACGCTATTGTTGAATTCCACA GCTTGACTAAGGAAGACTTGAAACAAATCGTTGACTTAATGCTTGCTGAAGTTAACCGGACATTGGCTAAGAAGGGCATG GATGTTAAGGTTACTGATACTGCAAAGCAATACCTTATTGATGAAGGTTACGATGAAGCCATGGGTGCTCGTCCTCTTCG TCGGGTTATCGAACGTGAAATCCGTGATAAGGTAACTGATTACTACCTTGACCACCTCGACGCAAAGAACCTTGTTGCTG AAATGAAGGATGGTCAACTCGTAATTGTTGATGCTAAGGACGCCTCAAAAGACGATAGTAAAGAATATACTTCACCATCT GAAAAGAAGGATGAAGAAAAAGACGATAAGAAGGAAGAAGACAAGAAGTCTGACGAAGATAAGAAAGACGAAAAGTAA Protein sequence : MAQNPMNPFDNDMNDIFNQLMGGMNGFNSDNRRYLINGREVTPEEFAEYRRTGQLPGGANPQQGGQPGPQPNAGKDSILH KLGRNLTQEAREHELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVSGDVPAAIKDKEIISIDI SGLEAGTQYRGSFEENMQKLVDEVKKAGNIILFFDEIHQIIGAGSTGDSSGSKGMSDIIKPALSRGELTVIGATTQDEYR NTIMKDAALARRFNAVTVNAPSKADTVAILKGIRDLYERHHNVKLPDDVLQAAVDYSVQYMPQRALPDKAIDLIDMTAAH LAAKHPARDAKAIEKDIEAEEKKQKAAAKKEDYKAAQDAKEKIADLKKQLSENSESEKVTATPEDVAKAVEQMTGIPVSK IGASDVERLKDMDKRLEGKVIGQDKAVEAVARAIRRNRAGFDEGDSPIGSFLFVGPTGVGKTELAKQLALDMFGSKDDII RLDMSEYSDRTAVSKMIGATAGYVGYEDNGNTLTEKVRRHPYSIILLDEIEKANPQVITLLLQVLDDGRLTDGQGNTIDF KNTVIIATSNAGYSNDAPVKMGRNEDEEDLIKKLTTYFRPEFLNRFNAIVEFHSLTKEDLKQIVDLMLAEVNRTLAKKGM DVKVTDTAKQYLIDEGYDEAMGARPLRRVIEREIRDKVTDYYLDHLDAKNLVAEMKDGQLVIVDAKDASKDDSKEYTSPS EKKDEEKDDKKEEDKKSDEDKKDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-125 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N134_00265 | YP_008325417.1 | ATP-dependent Clp protease ATP-binding protein | VFG0080 | Protein | 4e-140 | 49 |
| N134_00265 | YP_008325417.1 | ATP-dependent Clp protease ATP-binding protein | VFG0079 | Protein | 6e-133 | 48 |
