Gene Information

Name : N134_00155 (N134_00155)
Accession : YP_008325395.1
Strain : Lactobacillus reuteri TD1
Genome accession: NC_021872
Putative virulence/resistance : Unknown
Product : 50S rRNA methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 31471 - 31998 bp
Length : 528 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCCTGTGGATAACTTTGTGGATAAACTGTGGAAGGTAGTGGATATCTTGAATATAAAAATTATTGGTGTGGGTAAGTT
AAAAGAAAAGTATTTTAAAGCGGGAATTGCTGAATATGCTAAACGACTTGGACGTTATTGTAAATTTGAAATTGTTGAGG
TTCCTGATGAAAAAGCACCTGAATCTTTAAGCCAAGCAGAAATGGATGAAGTAATGGCAAAGGAAGGGGAACGGATTCTT
GATAAAATCAAAGATCGCGAATATGTATATGCTTTAGCGATTAAAGGTAAAGAACGTTCTTCTGAAGAGTTTGCAAAAGA
AATCAATAAATTAACAACTTATGGTCACAGTGATATTACTTTTGTGATCGGCGGTTCATTAGGGTTAAGTCCAGCAGTAT
TAAAACGGGCAGATGCTCAAATCTCGTTTGGGCGTTTTACCTTGCCTCATCAATTAATGCGTTTAGTCTTAAGCGAACAA
ATTTATCGAGCTTTTACCATCATCAATGGCCTCCCATATCATAAATAA

Protein sequence :
MPVDNFVDKLWKVVDILNIKIIGVGKLKEKYFKAGIAEYAKRLGRYCKFEIVEVPDEKAPESLSQAEMDEVMAKEGERIL
DKIKDREYVYALAIKGKERSSEEFAKEINKLTTYGHSDITFVIGGSLGLSPAVLKRADAQISFGRFTLPHQLMRLVLSEQ
IYRAFTIINGLPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-40 58
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-40 58
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 4e-40 57
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 6e-40 57
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 4e-40 57
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 4e-40 57
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 4e-40 57
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 4e-40 57
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 4e-40 57
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 4e-40 57
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 4e-40 57
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 4e-40 57
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 4e-40 57
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 6e-40 57
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-40 56
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 1e-36 56
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 5e-40 56
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-39 55