Gene Information

Name : N134_00115 (N134_00115)
Accession : YP_008325387.1
Strain : Lactobacillus reuteri TD1
Genome accession: NC_021872
Putative virulence/resistance : Virulence
Product : PhoP family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 22217 - 22942 bp
Length : 726 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGAGGGAATCATTGATATGGCAAAGAAAATTTTAGTTGTTGATGATGAAAAACCAATTTCTGATATCATCAAATTTAA
TCTTGAAAAAGAAGGATATGAAGTTGTCGTAGCCTATGATGGCGAAGCCGCTTTAGAACAAGTAGAAGCAGAAAATCCTG
ATTTAATTATTCTTGACCTAATGCTGCCGAAGACCGATGGACTTGAAGTGGCCAAGCGGGTTCGGGCTAAGCATACCATG
CCGATTATTATGGTAACCGCTAAAGATTCGGAACTAGATAAGGTGCTGGGGCTTGAACTTGGGGCCGATGATTATGTTAC
TAAGCCGTTCTCTAACCGCGAACTAGTAGCACGAGTAAAGGCTAATTTACGGCGTCAAGCAACTCTGAAGGCACCAGCAG
AGGAAGAAAATAATACCGATATTCAAATTGGCGACCTTACGATTCATCCTGAAGCTTACACCGTAACTAAGCGGGGCGAA
AATATCAATTTAACGCATCGTGAGTTTGAGCTTTTACACTATCTAGCTCAACATATTGGACAAGTTATTAACCGTGAACA
CCTTCTTCAAACTGTATGGGGTTATGACTATTTTGGGGATGTACGAACAGTTGACGTTACCGTTCGTCGGCTTCGTGAAA
AGATTGAAGACAACCCTAGTCACCCACAATGGTTAATTACCCGGCGTGGTGTTGGCTATTACCTAGCAAATCCTGATCAG
AATTAG

Protein sequence : 
MEGIIDMAKKILVVDDEKPISDIIKFNLEKEGYEVVVAYDGEAALEQVEAENPDLIILDLMLPKTDGLEVAKRVRAKHTM
PIIMVTAKDSELDKVLGLELGADDYVTKPFSNRELVARVKANLRRQATLKAPAEEENNTDIQIGDLTIHPEAYTVTKRGE
NINLTHREFELLHYLAQHIGQVINREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPQWLITRRGVGYYLANPDQ
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_012469.1.7685629. Protein 6e-70 71
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002951.3237708.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002952.2859905.p0 Protein 3e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_003923.1003749.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002758.1121668.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_009641.5332272.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_013450.8614421.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_007793.3914279.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_007622.3794472.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002745.1124361.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_009782.5559369.p0 Protein 2e-58 58
N134_00115 YP_008325387.1 PhoP family transcriptional regulator HE999704.1.gene2815. Protein 1e-50 54
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_012469.1.7686381. Protein 2e-43 50
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AF155139.2.orf0.gene Protein 1e-41 48
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AE016830.1.gene1681. Protein 1e-44 47
N134_00115 YP_008325387.1 PhoP family transcriptional regulator FJ349556.1.orf0.gene Protein 6e-43 47
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AE000516.2.gene3505. Protein 1e-34 44
N134_00115 YP_008325387.1 PhoP family transcriptional regulator HE999704.1.gene1528. Protein 2e-30 44
N134_00115 YP_008325387.1 PhoP family transcriptional regulator CP004022.1.gene3215. Protein 3e-37 43
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AM180355.1.gene1830. Protein 9e-40 43
N134_00115 YP_008325387.1 PhoP family transcriptional regulator DQ212986.1.gene4.p01 Protein 7e-40 43
N134_00115 YP_008325387.1 PhoP family transcriptional regulator CP000034.1.gene3834. Protein 8e-35 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator CP001918.1.gene5135. Protein 5e-30 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator CP001138.1.gene4273. Protein 9e-35 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002695.1.915041.p Protein 8e-35 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_005054.2598277.p0 Protein 9e-40 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_014475.1.orf0.gen Protein 9e-40 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AF130997.1.orf0.gene Protein 8e-38 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_013450.8614146.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002951.3238224.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_007793.3914065.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002758.1121390.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AE015929.1.gene1106. Protein 3e-31 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_010079.5776364.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_002952.2859858.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_007622.3794948.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator NC_003923.1003417.p0 Protein 4e-37 42
N134_00115 YP_008325387.1 PhoP family transcriptional regulator BAC0533 Protein 2e-34 41
N134_00115 YP_008325387.1 PhoP family transcriptional regulator CP000647.1.gene4257. Protein 2e-34 41
N134_00115 YP_008325387.1 PhoP family transcriptional regulator EU250284.1.orf4.gene Protein 4e-38 41
N134_00115 YP_008325387.1 PhoP family transcriptional regulator AF162694.1.orf4.gene Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N134_00115 YP_008325387.1 PhoP family transcriptional regulator VFG1702 Protein 4e-34 41
N134_00115 YP_008325387.1 PhoP family transcriptional regulator VFG1386 Protein 7e-31 41
N134_00115 YP_008325387.1 PhoP family transcriptional regulator VFG1389 Protein 6e-29 41