Gene Information

Name : N134_09825 (N134_09825)
Accession : YP_008327218.1
Strain : Lactobacillus reuteri TD1
Genome accession: NC_021872
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2055233 - 2055922 bp
Length : 690 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCAAAATTGAAATTAGTAGATGTTAACAAATATTATGGCGAGGGAATTAGCCGTGTCCATGTTCTTAAAGATGTTAA
TTTTTCTGCTAAAGCGGGAGAATTAAATTTGATTTTAGGGCCTTCTGGATCAGGAAAGAGTACCTTTTTAACAATTGCGG
GCGGTTTACAAACACCTACTTCAGGAAAAGTATTAATTGATGGAATTGATATTGAGAAATTGTCTTCTAAAAAGCGTGAT
GAACTACGCTTACAGAAGATTGGTTTTATTCTTCAGTCGTATAACTTATTACCCTATCTAAATGTAGCGGATCAATTTAA
GCTTGTTGATCGCATAAAGAAGAATGGGAACGTCTCATCAGAAGCTTTTGATGAATTATTGGAAAAGCTTGCAATAAAGA
AGCTGCTCAAGCAATATCCTTCTGAATTGTCAGGAGGTCAAAACCAGCGGGTAGCGATTGCACGTGCCCTTTATACTAAT
CCTGAGATAATTCTTGCAGACGAACCAACAGCGGCCTTAGATAGTAATTTAGTAAAGACAGTGGGGCAATTATTTCAAGA
TTTGGCTAAAAAGGAAGGAAAAGCAGTGATTGCTGTAACCCATGATTTACGTTTACGTGAATATGCAGATAATGTTTACG
AGTTAGCTGATGGGAAACTTACATTAAGTAAAAATTCTCCAGACCAATAA

Protein sequence : 
MSKLKLVDVNKYYGEGISRVHVLKDVNFSAKAGELNLILGPSGSGKSTFLTIAGGLQTPTSGKVLIDGIDIEKLSSKKRD
ELRLQKIGFILQSYNLLPYLNVADQFKLVDRIKKNGNVSSEAFDELLEKLAIKKLLKQYPSELSGGQNQRVAIARALYTN
PEIILADEPTAALDSNLVKTVGQLFQDLAKKEGKAVIAVTHDLRLREYADNVYELADGKLTLSKNSPDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-38 46
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 5e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N134_09825 YP_008327218.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-28 42
N134_09825 YP_008327218.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-27 42
N134_09825 YP_008327218.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-27 41