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Name : N134_00985 (N134_00985) Accession : YP_008325550.1 Strain : Lactobacillus reuteri TD1 Genome accession: NC_021872 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 242407 - 243552 bp Length : 1146 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGAAGTCAGTGAAAAAGTCAAAGTACTGCAAGATTTAATAAAAATCCATTCTGTCAATGGAAATGAAGTTGAAGTAGC CCACTACTTACAAAAACTTTTATCAAGTCACGGAATTGATTCAAAAGTTGATGAATTTGGTGACCGCCGTGCAAATTTGA TCGCGGAAATCGGAACTGGTGAAAGCAAAAAAATTCTTGGACTTACTGGGCACCAAGACACTGTGGCAGTACCTAATCCA GATCGCTGGCAACATGATCCCTTTGGCGGTGAAATTAACGGTGATTATGTTTTCGGTCGGGGAGCCGCTGACATGAAAAG CGGTCTGGCTGCTCAAGCCATCGTCTTAATCGAATTAAAAGAAGCTGGTCAACTGCCATCAGGAACGGTTAGATTTATTG CTACCGCCGGAGAAGAACTTGGTACTCCTGGTGCCTATCGATTACAAAAACAAGGGGTTGCCGATGATCTTGATGCATTA GTAGTCGGTGAACCAACTGGCGGAAACGTTATTTTTGCTCACTCCGGAAGTATGAACTATCGCGTTACTAGCTATGGAAA GTCTTGTCATAGTTCACATCCGCAAAACGGTATTAATGCAATTGAAGGGCTGTTAAAGTTTATCGAAGAAGAAAAACACC TTTTTGATAACACCAAAGCTGATCAATACCTCGGAAAAGTCCAACATAGTATTACAGTTATCGATGGTGGATCTCAAGTT AATACCATCCCCGACAGTGCTAGTTTGCAAGGAAATATCCGCCCTACGGCAGCATTTAATAATGTTAAAGTCGCAGATCG ATTAAATGATGCGCTTGAATATATTAACCACACAACTCCTTTCCAACTAGAGCTAAAAATTATTCAAGATTTTTATCCAA TTGCGACAGAACCTAATAACGATTTTGTCCAAATTGCCCTCAATGCTGCCCAGCGAAACTATCCAAATGACATCAAGCTT GATATTATCAATGGTGCAACTGATGCAAGTGTATTTACATTAAATCGTCCCAACCTTCCAGTCGTGATTTTAGGATGTGA CGATTGGAACGTTGCTCATCAAACTGATGAATATACAACTATTTCGAGTTACGTTGCTACAATTAAAGCTTATAAGCAAA TTATTCGTGATTTCTTCAAAGAGTAA Protein sequence : MEVSEKVKVLQDLIKIHSVNGNEVEVAHYLQKLLSSHGIDSKVDEFGDRRANLIAEIGTGESKKILGLTGHQDTVAVPNP DRWQHDPFGGEINGDYVFGRGAADMKSGLAAQAIVLIELKEAGQLPSGTVRFIATAGEELGTPGAYRLQKQGVADDLDAL VVGEPTGGNVIFAHSGSMNYRVTSYGKSCHSSHPQNGINAIEGLLKFIEEEKHLFDNTKADQYLGKVQHSITVIDGGSQV NTIPDSASLQGNIRPTAAFNNVKVADRLNDALEYINHTTPFQLELKIIQDFYPIATEPNNDFVQIALNAAQRNYPNDIKL DIINGATDASVFTLNRPNLPVVILGCDDWNVAHQTDEYTTISSYVATIKAYKQIIRDFFKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 3e-66 | 42 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-66 | 42 |
