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Name : N134_08740 (N134_08740) Accession : YP_008327005.1 Strain : Lactobacillus reuteri TD1 Genome accession: NC_021872 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1792047 - 1793651 bp Length : 1605 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCAAAGTAATTATAACATTAATCAACTTAGTTTGACTATGGCAACTGACTATCAACCTGAAGAAAATCATCCAGCTTA TTATATCCATCAACTGGTCGAAAACTTGGCAATTTCTAAGCCTAATATTATGGGACGATCACGTGAATATGATCAGAGAA TGCTTTTGAAATTAGTCCTACTGGCCTATAGTTACGGCATTGTTTCTTGTCGGAAAATTGAAAGATTTGCTCGGGAAAAT ATTGTCGCAATGTGGTTAACTCAAGAACAACGCCCCACTTATCGGACAATTGCTAGATTTATCGTTTCCAAAGAACTGAC AGAAATGATTCAAGCTAGTTTTAAAGATTTTCATGATTATCTTCAAAAGGCTGGGTTGATTGATGAGGCTTCTTTTATTG ACGGTACTAAAATTCTTGCTAATGCTAATAAGTATTCCTTCGTATGGAAGAAGCGTACTATCAAATATAGTGATTTGAAT GTTGTCAAAGCACGAAAGTTAATTAATGAAATGCGTGAGGAAGTCAAAGTAGATGCTAACTTGGACGATTTTCAAATCGA TGAATTAGATACTACGATTGCACTGTTAGAACAACGAATTGAAGAACTAAATAAGCAGATAGAAGAAACCGCTAGGGTTT CGCCTAATCCCGCAAAGCAAGAGCGCCGCCATGCTAAAAAATACCTTCGTGCATTAGATCATTGTCGTCAGAAAAATATC GAGTACAAAGCTCAAGTAGCCACCGCTGGTAAACGTAATAGCTATTCTAAAACTGATCATGATGCAACCTTCATGCGCTT AAAGGAAGATCCAATGCGTAACGGTCAAACAAAACCTGCATATAATCTTCAGATCATGACTAACTCACAGTTCGTACTTG GCTATGATCTCCTGCAAAATCCAACTGACACTCGAACGCTAATCCCATTTCTTAAACATCTTGATCAAAACGGCGTTTTG GGTAAAGAAATAGTAGCTGATGCTGGCTATGGTTCTGAACGTAATTATAGATATATTGAAGATAAGTTACCTGATTGTAC GGCTCTCATTCCCTACAGCACAATGCTTAGAGAGAACAGTCGTAAGTGGAAGTCTGATGATCGCAAAGTGATGCATTGGG AATATCATGCCAAGGATGATTATTATATCAATCCGGTCGGTGTTCGTTTTAACTTTAAACGTTACGCTTATAGTAATGAT ACGGATGGATTTCACCGTGACTTCAAAGTATATCAAGCAGAGAAATACGATGAAAATCATCAAATTAATCCTAAAGCATT GACACCACATGGCAATACCAAGTACATCATGGTAAATCCACAATGGGAGTATTTTAAAGCACGGAAGTCGTTTTCAAGTT CCAATACTTATTCACGTCGTAAGTACGATGTTGAAACAGTTTTTGGTAATTTGAAGGCTTATTTGGGATGCACGAGGTTC ACGGTACGTGGCCTCAAGAAAGTCAAAAAGCAAATTGGCATCGTCTTAATGGCATTGAATATGAAGAAATTGGCCGGAAG GCCGTCCAATTTCCTAGGTAAAAAATCAAAAAGAAAGATCCATTCGAAAATTTTTTCAATTTCCGAATGGATCTTCTTAA TTTAG Protein sequence : MQSNYNINQLSLTMATDYQPEENHPAYYIHQLVENLAISKPNIMGRSREYDQRMLLKLVLLAYSYGIVSCRKIERFAREN IVAMWLTQEQRPTYRTIARFIVSKELTEMIQASFKDFHDYLQKAGLIDEASFIDGTKILANANKYSFVWKKRTIKYSDLN VVKARKLINEMREEVKVDANLDDFQIDELDTTIALLEQRIEELNKQIEETARVSPNPAKQERRHAKKYLRALDHCRQKNI EYKAQVATAGKRNSYSKTDHDATFMRLKEDPMRNGQTKPAYNLQIMTNSQFVLGYDLLQNPTDTRTLIPFLKHLDQNGVL GKEIVADAGYGSERNYRYIEDKLPDCTALIPYSTMLRENSRKWKSDDRKVMHWEYHAKDDYYINPVGVRFNFKRYAYSND TDGFHRDFKVYQAEKYDENHQINPKALTPHGNTKYIMVNPQWEYFKARKSFSSSNTYSRRKYDVETVFGNLKAYLGCTRF TVRGLKKVKKQIGIVLMALNMKKLAGRPSNFLGKKSKRKIHSKIFSISEWIFLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 8e-77 | 44 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 6e-77 | 44 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 8e-77 | 44 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 8e-77 | 44 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 7e-75 | 43 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 6e-65 | 41 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-75 | 41 |
