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Name : N134_08185 (N134_08185) Accession : YP_008326902.1 Strain : Lactobacillus reuteri TD1 Genome accession: NC_021872 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1678194 - 1680686 bp Length : 2493 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGATAATATGTTCACGCCAAGTGCAAAGCATGTTCTAGCAATTGCACAAGAACAAGCAAAATACTTTAAACACCAAGC AGTAGGGACTGAACACCTTTTGCTTGCCCTCTCAATGGATAAAGATGGGATTGCTAACAAAATATTTGAACAATTTTCTA TTACAAGCGATGATATTCGTGAAGAAATTGAACGCTTAATTGGCTATGGAACGCTAGAAAATCTGGGAGCTTCAGATTAT CTTCCATATTCACCAAAAGCAAAGCAGGTATTATCATTAGCTGGTCGAGAAGCTCAACAAATACATGCCTTAAAAATCGG CACTGAACACTTATTACTAGCATTAATTGCAGATGAAAGTGTCCTATCTTCACGAATCTTGTATAGTTTAGATGTTGTTC CGCGGCAGATGAGAAAAGTAATTTTACGGCGGTTAGGGATTGCTGATAGTCAGCAACGCAATCCTAATCGTCAATCATCT CGTCGACGGATTCAGCAAACTGGTACACCAACATTAGATAAATTAGCTCGTGATATGACAGAACTTGCTCGGAATGGCCA GCTTGATCCTGTAATTGGTCGAAATAAGGAAGTTAAACGTGTGGAGCAGATTCTTAGTCGTCGTACCAAGAACAATCCTG TGCTGATCGGCGAACCTGGTGTAGGAAAGACAGCGATTGCTGAAGGACTTGCTCAGCGGATGGTTGATGGTAAGGTTCCA GCTGAATTGACTAATAAACGTTTGATGATGCTTGATATGGGATCATTAGTTGCGGGTACCAAGTATCGAGGAGAATTTGA AGATCGTCTTAAAAAAGTAATTGATGAGATTCAAAACGACGGGCATGTGATTCTTTTTATTGATGAACTCCATACCTTAA TTGGTGCTGGTGGCGCTGAAGGGGCAATTGATGCCTCCAATATTTTGAAACCAGCCTTAGCTCGAGGCGAGTTGCAAACA ATTGGTGCTACTACGCTTGATGAATATCAGAAATATATAGAATCGGATGCAGCACTTGAACGACGCTTTGCCACTGTTCA AGTTGATGAGCCGACTACTGACCAAACTCTACAAATCCTGCGAGGACTACGACCAAAGTATGAGGAGCACCATCATGCTA AGATTACTGATGAAGCGCTAGAAGAAGCAATTAAATTGTCAGATCGTTATATTTCGGATCGGTTCTTGCCAGATAAAGCA ATTGATCTTATTGATGAATCGGCAGCTATGGTTCGAATTGATGCTGAAGATAAGAAAAATCATCAGCCTTCATTAGAAAG TCAGTTAGAAGATTTGCGAACCCAAAAAGAAGAAGCAATTGATAATCAAGACTTTGATCGTGCGGCTACTCTTCGTCAAC AAGAATTAGCACTAAAAGATAAGATTGATCGCAAAAAGCAACGTACTCAACAAAAGGATTCTCATAACTATAAATTGAAA GTAACTGGTGAAAACATTGCACAAGTTGTTGCTGAATGGACAGGAGTTCCTTTAACTCAATTGAAGAAGAGTGAGAGTGA ACGATTGGTTAACTTGGAAAAGGTTCTGCACCAACGAGTAATTGGTCAAGATGAAGCAGTTACCGTAGTCGCTAAGGCAA TTCGGCGTGCACGAAGCGGGCTTAAGGATCCTAGTCGGCCGATTGGTTCCTTTATGTTTTTAGGACCGACTGGGGTAGGA AAAACAGAGCTTGCCAAGGCATTAGCCGCTGCAATGTTTGGCTCGGAAGATAATATGATCCGGATTGATATGTCAGAATA TATGGAAAAATATAGTACTAGTCGCTTGATTGGTGCCGCTCCAGGATATGTCGGTTATGACGAGGGTGGCCAATTAACTG AAAAAGTACGACAACATCCATATTCAGTTGTTTTATTAGATGAAGCTGAAAAGGCACATCCAGATGTATTTAATTTATTA CTTCAAGTTTTAGATGATGGTTACTTAACTGATGCAAAAGGTCGGCGCGTTGATTTTAGAAATACCATTATTATTATGAC TTCTAACCTTGGAGCAACTCAGCTTCAGGATGAGAAAGAGGTTGGTTTTGGGGCAAAAGATATGTCACAAGACTATAATG CGATGGCGGCGGCGATTAAGCAACAAATGAGGTTATACTTCCGCCCAGAATTTCTTAATCGGATTGATGAAACGATTATC TTCCATTCATTACAAAAGAAAGAACTTCATCAAATTGTTAAACTCATGGTTAATGATTTAAATAAGCGGGTAAGTGAGCA AGGGATTAACTTGAAAGTTACGCCTGCTGCAATTGATGTAATCGCAAAGCTTGGTTACAATCCAGCTTATGGAGCTCGTC CACTTCGTCGTGCTTTACAAGATCATGTTGAAGATGATTTGAGTACTGGCCTGCTTAGTGGTGAAATCAATGTTGGGGAT GACGTAACAGTAGGTGCGCATCAAGGTAAAATTACTTTTAAAGTAAAGAAGCCGGATGAAGATAAAGCTGTTGAATTAAA ATTGAATAAATAA Protein sequence : MDNMFTPSAKHVLAIAQEQAKYFKHQAVGTEHLLLALSMDKDGIANKIFEQFSITSDDIREEIERLIGYGTLENLGASDY LPYSPKAKQVLSLAGREAQQIHALKIGTEHLLLALIADESVLSSRILYSLDVVPRQMRKVILRRLGIADSQQRNPNRQSS RRRIQQTGTPTLDKLARDMTELARNGQLDPVIGRNKEVKRVEQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRMVDGKVP AELTNKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIQNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQT IGATTLDEYQKYIESDAALERRFATVQVDEPTTDQTLQILRGLRPKYEEHHHAKITDEALEEAIKLSDRYISDRFLPDKA IDLIDESAAMVRIDAEDKKNHQPSLESQLEDLRTQKEEAIDNQDFDRAATLRQQELALKDKIDRKKQRTQQKDSHNYKLK VTGENIAQVVAEWTGVPLTQLKKSESERLVNLEKVLHQRVIGQDEAVTVVAKAIRRARSGLKDPSRPIGSFMFLGPTGVG KTELAKALAAAMFGSEDNMIRIDMSEYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHPYSVVLLDEAEKAHPDVFNLL LQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKEVGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNRIDETII FHSLQKKELHQIVKLMVNDLNKRVSEQGINLKVTPAAIDVIAKLGYNPAYGARPLRRALQDHVEDDLSTGLLSGEINVGD DVTVGAHQGKITFKVKKPDEDKAVELKLNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N134_08185 | YP_008326902.1 | ATP-dependent Clp protease ATP-binding protein | VFG0079 | Protein | 0.0 | 59 |
| N134_08185 | YP_008326902.1 | ATP-dependent Clp protease ATP-binding protein | VFG0080 | Protein | 2e-157 | 51 |
| N134_08185 | YP_008326902.1 | ATP-dependent Clp protease ATP-binding protein | VFG2084 | Protein | 2e-97 | 42 |
