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Name : rplS (N134_06455) Accession : YP_008326578.1 Strain : Lactobacillus reuteri TD1 Genome accession: NC_021872 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : - COG ID : - EC number : - Position : 1339693 - 1340079 bp Length : 387 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCGGCGAAAGGAAAGAAATATATTATGCGTCAAAACAAGTTAATCGAAAAGATTACTGCTAGTCAATTACGGGATGA TATTCCAGAATTCCGTGCCGGTGATACTGTTCGGGTTCACGCTCGGATCGTTGAAGGTTCACGTGAACGTATCCAAATGT TCGAAGGTGTTGTTATCAAGCGCCACGGTGCTGGTATCAGTGCTACTTACACTGTACGTAAGATCAGTAACGGTGTAGGT GTTGAACGTACTTTCCCAGTTCACTCACCACGTGTTGACAAGATTGATGTTCTTCGTTACGGTCGTGTACGTCGTGCTAA GCTTTACTACTTACGTGAACGTACTGGTAAGGCTACTCGTATCGCTGAACGTCGTCGCGACAACTAG Protein sequence : MSAKGKKYIMRQNKLIEKITASQLRDDIPEFRAGDTVRVHARIVEGSRERIQMFEGVVIKRHGAGISATYTVRKISNGVG VERTFPVHSPRVDKIDVLRYGRVRRAKLYYLRERTGKATRIAERRRDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-37 | 74 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-27 | 57 |
