Gene Information

Name : A464_664 (A464_664)
Accession : YP_008321260.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 670924 - 671601 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
GTGACGAACGTTCTGATTGTTGAAGATGAACAGGCCATCCGCCGCTTTCTGCGCGCCGCGCTGGAAGGCGACGGTCTGCG
CGTGTATGAGGCGGAAACATTACAACGCGGTTTACTGGAAGCCGCCACGCGAAAGCCCGATCTGATTATTCTCGACCTCG
GCCTGCCAGACGGTGACGGTATCGATTTCATTCGCGACCTGCGTCAGTGGAGCGCGATACCCATTATTGTGCTTTCCGCC
CGTAGCGAAGAGAGTGATAAGATTGCCGCGCTTGATGCCGGGGCTGACGATTACCTGAGCAAGCCGTTCGGCATTGGCGA
GCTACAGGCGCGTTTACGTGTAGCGCTAAGACGGCACACCGCCAGCCCTTGCGCCGATCCTGTCGTCCGCTTTTCCAACG
TGACGGTCGATCTCGCCGCACGCGTGATCCACCGTGGCGACGAAGAAATCCATCTGACGCCGATTGAGTTCCGCCTGCTG
GCGGTATTACTCAATAATGCCGGCAAGGTATTAACCCAACGGCAGTTATTAAACCAGGTCTGGGGCCCTAACGCCGTGGA
GCATAGCCACTATTTGCGCATCTATATGGGGCATTTACGCCAGAAACTGGAACAAGATCCCACCCGTCCACGCCACTTTA
TTACCGAGACCGGCATTGGCTATCGCTTTATGCCATGA

Protein sequence :
MTNVLIVEDEQAIRRFLRAALEGDGLRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIDFIRDLRQWSAIPIIVLSA
RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHTASPCADPVVRFSNVTVDLAARVIHRGDEEIHLTPIEFRLL
AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPTRPRHFITETGIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-24 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-24 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 2e-24 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_664 YP_008321260.1 DNA-binding response regulator KdpE VFG1390 Protein 5e-28 41