Gene Information

Name : A464_578 (A464_578)
Accession : YP_008321174.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 585694 - 586929 bp
Length : 1236 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGTGTATAAAGTTCCGCTTGAACAAAATGTTCTGGAAGCGGCGCAAGAGCGTATAGCGTGGACCCTTGAAACCTT
GCCACGGGTCTGCGTTTCATTTTCTGGTGGAAAAGACTCAGGCCTGATGCTGCACCTGACAGCGACGCTGGCGCGCAAAA
TGAATAAAAAGATCCACGTTTTGTTTATTGACTGGGAGGCCCAATTCTCCTGTACTATCGACTATGTGCAATCGCTACGC
GAATATTACGCAGATGTGATTGAACGGTTTTATTGGGTCGCTTTACCCTTGACCACGCAGAATTCCCTTTCACAATATCA
GCCGGAGTGGCAGTGCTGGCAACCTGGAGCCGACTGGGTACGACAACCGCCGGAAGAGGCGATTACCGACCCGGCGTTTT
TTTCGTTTTACCAACACGGCATGACCTTTGAACAGTTCGTTCGCGATTTTGCTGACTGGTTTTCAGACAAGCGCCCTGCC
GCCATGCTGGTCGGGATTCGCTCCGACGAGTCCTATAACCGTTTTGTCGCTATCGCTAACTCACATAAACTGCGCTTTGC
CGACGATAAACCCTGGACCACATTAGCGCCAGGGGGGCACACCTGGTATATCTACCCCATCTATGACTGGAAAACTGCCG
ATATCTGGACCTGGTTCGCCAAAACAGGCAAACCCTGTAACCCATTGTATAATTTAATGTATCAGGCTGGCGTACCGTCT
CGTTATATGCGGATTTGCGAACCGTTCGGCCCGGAACAGCGACAGGGATTATGGCTATATCATGTTATCGAACCTGAGCG
CTGGGCGGCCATGTGCGCCAGAGTCAGCGGCGTACTCAGCGGCGGGATATATGCCGGACAAGATAGCCATTTCTACGGCC
ACCGAAAAATTTTAAAACCCGATCACCTTAACTGGGAAGAGTACGCTCTGCTCCTGCTACACAGTATGCCCGAAGCAACT
GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCCAGGAGACGATCCCACAGATGCA
ACAAGGCGATATCGGGTCACGAGACCTACCGTCATGGCGGCGGATCTGTAAGGTATTACTAAACAATGATTACTGGTGCC
GGGCACTGTCGTTCAGTCCGACAAAACCGAAAAGTTACCAGCGCTATAACGAACGCATGAAAACTAAACGCCAGGAATGG
GGGATCTTATGCAACACCGACTCGCAACCGAAATAA

Protein sequence :
MSVYKVPLEQNVLEAAQERIAWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIDYVQSLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWVRQPPEEAITDPAFFSFYQHGMTFEQFVRDFADWFSDKRPA
AMLVGIRSDESYNRFVAIANSHKLRFADDKPWTTLAPGGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPS
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDSHFYGHRKILKPDHLNWEEYALLLLHSMPEAT
AEHYRNKIAVYLQWYKKKGQETIPQMQQGDIGSRDLPSWRRICKVLLNNDYWCRALSFSPTKPKSYQRYNERMKTKRQEW
GILCNTDSQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 4e-125 61
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 2e-125 61
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 7e-125 60
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-126 60
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 7e-125 60
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-126 60
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-126 60
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-124 60
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-126 58
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 1e-126 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_578 YP_008321174.1 Co-activator of prophage gene expression IbrA VFG1504 Protein 7e-125 60