|
Name : A464_4512 (A464_4512) Accession : YP_008325104.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Unknown Product : Type IV secretory pathway VirB4 component Function : - COG functional category : - COG ID : - EC number : - Position : 4565372 - 4568029 bp Length : 2658 bp Strand : - Note : - DNA sequence : ATGAGTGAACGGCGCGGCCTGACCGAACAGGCACTGGACGCCAGCTATTGTAAAGGCCCGTCATTTGTCGACTGGCTGCC GTGGGTGGAGTTTTTGCCGGATTCACAGACGCTACTGCTGGAGGATGGCCGTTCGGTGGGTGCAGTGTTCGAACTGACGC CTGTTGGCACCGAAGGCCGTTCGATGGCGTTTCTGGAGCAGGTCCGCGATACCGTCACTGACGCATTGCAGGATGCCTTT GATGAGCACGAACGTGCGCCATGGGTAGTACAGTTTTTCTGTCAGGACGAGGACGACAGTGAAGCGTGGCTGGCATCACT TGCCTCTTACGCCGCACCGGAAATCCGCGACTCCGCCTTTACCCGAGAATGGCTTGCGCAGATGATAAACCATATGACCG CCCTCACCCGCGATGAAGGGCTGTTTCTCGATAACACCGTCACCCGTACCCGCTGGCGGGCGACGTGGCGGCGCACGCGG ATGGTGATCTACCGCTTGCTGCCCGGCCTCTCGCCGGATGAACCGTCACCGGAAGAGACGCTGAATAATATCTGCGAACG GCTCACCGCCGGCCTGAAGGCGGCAGGCATCAGCGCAGTCCGTCAGAATGAGCAGGCCATTCACCGCTGGCTGGTGCGCT GGTTTAACCCTGCGCCTACAGTGGAAGATAAAAAAGCCTTCTGGCGGCAACTGGATTTACCGGAAGCAGAATCCCAGCCC GTCATCACCGATTTCGCCGAACGACTGCTGACAAGCGAGCCGCGCTCAGATGCGGGGAACGGTGTCTGGTGGCTGGATAA CCGCCCACATAAAGTGGTGGTGGTCGACCGCCTGCGCAAAGCGCCGCCACCCGGCCTGCTGACCGGAGAAACCACGCGTG GCGACGGTATCAACGCCCTGTTCGACCTGTTACCAGCAGGCACTATCATGAACCTGACGGTGGTGGTGTATCCGCAGGAC AAACTGGAGCAGCACATCAGCCACCTTTCCGACCGGGCGATTGGCGACAATACCGATTCGGAATACACCCGCCGCGACTG CCGCGAGGTGCGCAGCTATCTGAAAGACGGCCATAAGCTCTACCGCAGTACACTGTCGTTTTACCTGCATGCGCCCGATA CTGATACCCTGTTTCGCCAACAACGCCAGCTACACAGCCTGTTGCTCAACGCCGGGCTGGTTCCGGTGCAGGAGCAACAC GAAGTCGCACCACTCAGCCACTGGCTGCGGTGGCTGCCGATGTGCTTCGATCCCCTGCGCGATCCGCGTGGGCTGTATAC CCGGCTCAACTTCGTCCAGCATATCGCCGGGCTGCTACCTGTTTACGGGCGGGAAACCGGCACCGGGCATCCGGGAATTT GCTATTTCAACCGAGGAGGCGGACCGCTGTGCTTCGATCCTCTGAATAAGCTGGATCGCGCGCAGAACGGCCACCTGCTG CTACTTGGCCCGACCGGGGCGGGCAAATCCGCCACGCTGAACGCGAAAATCGCGCAACTAATGGCGCTTCATCGCCCGCG CCTGTTCATCATCGAGGCCGGAAACTCATTTGGCCTGATGGCCGACTACGCCGCCGCCCACGGCCTGACGGTGAACAAAA TCAGCCTGCGCCCAGGATCCGGCGTCACTCTGCCCCTGTTCGCTGATACGTGGCAACTGGTGGAACAGGCAGTTACCGAC GCCGAACCGCCGGAGGACGAAGAGAGCGACAGCGATGACCAGCGCGACGTTCTGGGCGAGATGGAGATCACCGCCCGGCT GATGATCACCGGAGGCGAAGCGAAAGAGGATGCGCGCCTCACCCGGCCGGATCGGGCGATGATCCGCCAGGCCATTATCG CCGCTGCCCACACCTGTTATGAGGAAAAACGCCAGACGCTGACCCAGGATATCCGTGACGCACTGTTCGCCCTTTCCCGC GATGCCAGCCTGCCGGAAGCCCGCCGCCAGCGGGCGTATGAGATGGCGGAATCCATCAACCTGTTCTGTGCCGGGTTTGA AGGCGAACTGTTTAACCGCGAAGGCACGATGTGGCCGGAGGCGGATATCACCCTAGTGGATCTCGCCACCTTTGCCCGCG AAGGTTATGAGGCACAGCTTGCCATCAGCTATATCTCGCTGATTAACCATATCAACAACCTCGGCGAGCGCGACCAGCAT CTGGCGCGGCCCATCGTTAACATCACCGATGAGGCGCATATCATTACCGTTAATCCGCTGCTGGCGCGTTTTCTGACCAA GGGCTCAAAGATGTGGCGCAAGCTCGGCATCTGGCTATGGCTCGCCACCCAGAACCTGGCAGATTTTCCTGACGAGGCGA AGAAACTGCTCAATATGATCGAGTGGTGGGAACTGCTAGTAATGCCGCCGGAAGAGATTAATCAGGTTTGCCGATTTAAG GCACTGACCGAGGAACAACGGCAACTGCTGCGCTCTCCGGTGAAATCACCGGGGCAATATACCGAGGGCGTGGTACTGTC GCCTCGGGTTGAGGCGCTGTTTCGGGTAGTGCCGCCAGCGCTCTATCTGGCGCTGGCAATGACCGAGAAGCATGAGAAGG CGGAAAGGATGCGGATTATGCGGGAGATGGGGTGTAGTGAGGTTGAGGCGGCTCTCCTTGTCGCTCAGCAGTTGGTTCCT GACGAACAATTTGACTAG Protein sequence : MSERRGLTEQALDASYCKGPSFVDWLPWVEFLPDSQTLLLEDGRSVGAVFELTPVGTEGRSMAFLEQVRDTVTDALQDAF DEHERAPWVVQFFCQDEDDSEAWLASLASYAAPEIRDSAFTREWLAQMINHMTALTRDEGLFLDNTVTRTRWRATWRRTR MVIYRLLPGLSPDEPSPEETLNNICERLTAGLKAAGISAVRQNEQAIHRWLVRWFNPAPTVEDKKAFWRQLDLPEAESQP VITDFAERLLTSEPRSDAGNGVWWLDNRPHKVVVVDRLRKAPPPGLLTGETTRGDGINALFDLLPAGTIMNLTVVVYPQD KLEQHISHLSDRAIGDNTDSEYTRRDCREVRSYLKDGHKLYRSTLSFYLHAPDTDTLFRQQRQLHSLLLNAGLVPVQEQH EVAPLSHWLRWLPMCFDPLRDPRGLYTRLNFVQHIAGLLPVYGRETGTGHPGICYFNRGGGPLCFDPLNKLDRAQNGHLL LLGPTGAGKSATLNAKIAQLMALHRPRLFIIEAGNSFGLMADYAAAHGLTVNKISLRPGSGVTLPLFADTWQLVEQAVTD AEPPEDEESDSDDQRDVLGEMEITARLMITGGEAKEDARLTRPDRAMIRQAIIAAAHTCYEEKRQTLTQDIRDALFALSR DASLPEARRQRAYEMAESINLFCAGFEGELFNREGTMWPEADITLVDLATFAREGYEAQLAISYISLINHINNLGERDQH LARPIVNITDEAHIITVNPLLARFLTKGSKMWRKLGIWLWLATQNLADFPDEAKKLLNMIEWWELLVMPPEEINQVCRFK ALTEEQRQLLRSPVKSPGQYTEGVVLSPRVEALFRVVPPALYLALAMTEKHEKAERMRIMREMGCSEVEAALLVAQQLVP DEQFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 56 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 56 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 56 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 55 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 55 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 54 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 53 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 52 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 50 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 50 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 50 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 50 |
