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Name : A464_4502 (A464_4502) Accession : YP_008325094.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : type 1 fimbriae anchoring protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 4555461 - 4557968 bp Length : 2508 bp Strand : + Note : - DNA sequence : ATGAATAACCCTAATTCCCGACTGATGATCTTCCTGCTGGCGCTGCTGCTGATTATGGTGCTGCTATTGGGTTATCTGCG TCATGCGGAAGCCCGCGAGACCTTCAATACCCACGCGCTGGAGCTGGACAGCCCGGGCCAGGCGGTCGTTGACTTATCCG CCTTTTCCGAAGCCGATGGCCAGCTACCGGGCACTTACCGGGTGACGGTGTACGTCAACGGCGAGCAGCAGGGCGAGGCG CAGGATATTGCCTTTGTTACCGGGGCAGATAAAAAACTCACCGCACAGTTAACCCCGTCGATGCTGAAAGCCTGGGGCGT GAATACCGCCGCGTTTCCTGCGCTTGCTGCACTGCCAGCGGACAAACCGCTGGAGGATATTGGCCGCTATATCCCGATGG CTTCCAGCGAACTGCGTTTCAGTAAACTGCAACTGAATCTCAGTATCCCGCAGGCGGCGATGAGCGCCACCGCGCGCGGC TGGGTGGATCCGTCCGAATGGGACGAGGGCGTACCTGCCGCGCTGCTGAACTATAACCTCAGCGGCAGCAATACCTGGCG CGACGGGGAAAATGGCTCCGATGATAACTACTACGCTAACCTGCAGAGCGGGCTGAACCTAGGCGCGTGGCGGCTGCGCA ACTATTCCACCTGGAATTACGACGAGGATAACGGCAGCCACTGGGATTCAGTGAACACGTATCTTCAGCGGGATATCCAG CGCCTGCAGGGGCAACTTACGCTCGGCGACAGCTATACCCCGTCGGACATCTTCGACAGCGTGCAGTTTCGCGGCGCGCA ACTGGCGTCGGATGACAATATGCTGCCGGACAGCCTGCGCGGGTTTGCCCCGATCATCCGCGGTATTGCCCAGTCGAACG CCCAGGTCACCATTAAGCAGAACGGCTACACCATCTATCAGAGCTACGTCGCACCGGGGGCCTTCGCCATCAGCGATCTC TACCCGACATCGGGCAGCGGCGATCTGGAGGTAACGATTAAAGAAGCCGACGGCAGCGAGCGAACCTTTATTCAGCCATT CTCTGCGGTACCGATTATGCAGCGTGAAGGCCGTCTGAAGTATGCCCTCACTGCCGGGAAATACCGCAGCGGCAACAGCG ACAGCGATGAGCCTGAGTTTGGCCAGATAACGGCAATTTACGGCCTGCCGCACGCCATCACGATTTATGGCGGCACGCTG TACTCGGAGGACTATCAGTCCGGGGCGGCGGGTCTGGGGTTTGGTCTCGGCGAGCTGGGTTCAGTTTCCGCCGATATCAC CGCTGCACACACCACCCTTAATAACGATGAAACTCACGACGGCCAGTCGTACCGGGTGCAGTACTCAAAAGATTTTCAGG CCACCGATACCAGCTTCACCCTGGCGGCGTACCGCTATTCCACGGAAGGGTTCTATACCTTCCAGGAAGCGAACGACTTA CGCTCGGACAGCGATGATGGCTGGCGGCTGACGTACAACAAACGGCAGAAACTGCAGTTCGATCTCACCCAGAGTATCGG CAGCTACGGTTCGTTCTTTGTTTCCGGCTACCAGCAGGATTACTGGCATGAGGACGGTTACGAGCGCACCCTCAGTACCG GCTGGAACGGCAATATCAACGGTATCAGCTACAGCGTTTCCTACAGCTACAGTGATTATCCGGACAGCACTCAGCCTGCC GACCAGCAGCTGGCGTTCAGCATCCAGGTTCCTCTCAGCCGCTTTATGCCGAACGCGTGGGCCAGCTACAGCGTTAACAC CGCGAAGCATGGCGACACCCGCCAGCAGGTGGGCCTCAATGGAACGGCGCTTGCCGATAACAACCTCAGCTACAGCCTCC AGCAGAGCTACACCAACCACGGCACGGGCGGCTCCGGCAATATCAACGCTGACTATAAAGGCGGGCAGGGGGAAATCACC GGCGGCTACAACTATGACGACGACACGCAGCAGGTGAACTATGGCCTGAAAGGGGGGATTGTCGTCCATCCGCATGGCGT CACGCTTTCCCAGCCGCTCGGAGATTCGCTTGCCATCGTGAAAGCGCCCGGCGCGGATGACGCGAAGGTGCAGAACAACA CCGGGGTTTATACCGACTGGCGCGGTTACGCGGTGGTGCCGTACGTCAACACCTACCGGAAAAACCGCATCGCACTGGAC ACCAGCACGCTCGGTGATGGAGTCGACATCGACACCGCCGTGCAGACGGTGACGCCAACGCAGGGAGCAGTGGTGATGGC GGACTTCAACACCCGCGTCGGACGGCGCGTACTGATGACGCTGCTTTACCGTGGGTTGCCGGTGCCGTTCGGCGCTCAGG CGAAAATGAAGGAAGGCGGCAGCGGCATCGTTGGCGATGACGGACAGGTATACCTGACGGGCGTCCCGGATGAAGGTGAT ATCACGGTGAACTGGAACGGAAAACAGCAGTGCGTGGTGCATTATCGGCTACCGGAGAGTGCCGCAAACGCGCCGGTAAC GGAAACAGAACAGGAGTGCAGGGAATGA Protein sequence : MNNPNSRLMIFLLALLLIMVLLLGYLRHAEARETFNTHALELDSPGQAVVDLSAFSEADGQLPGTYRVTVYVNGEQQGEA QDIAFVTGADKKLTAQLTPSMLKAWGVNTAAFPALAALPADKPLEDIGRYIPMASSELRFSKLQLNLSIPQAAMSATARG WVDPSEWDEGVPAALLNYNLSGSNTWRDGENGSDDNYYANLQSGLNLGAWRLRNYSTWNYDEDNGSHWDSVNTYLQRDIQ RLQGQLTLGDSYTPSDIFDSVQFRGAQLASDDNMLPDSLRGFAPIIRGIAQSNAQVTIKQNGYTIYQSYVAPGAFAISDL YPTSGSGDLEVTIKEADGSERTFIQPFSAVPIMQREGRLKYALTAGKYRSGNSDSDEPEFGQITAIYGLPHAITIYGGTL YSEDYQSGAAGLGFGLGELGSVSADITAAHTTLNNDETHDGQSYRVQYSKDFQATDTSFTLAAYRYSTEGFYTFQEANDL RSDSDDGWRLTYNKRQKLQFDLTQSIGSYGSFFVSGYQQDYWHEDGYERTLSTGWNGNINGISYSVSYSYSDYPDSTQPA DQQLAFSIQVPLSRFMPNAWASYSVNTAKHGDTRQQVGLNGTALADNNLSYSLQQSYTNHGTGGSGNINADYKGGQGEIT GGYNYDDDTQQVNYGLKGGIVVHPHGVTLSQPLGDSLAIVKAPGADDAKVQNNTGVYTDWRGYAVVPYVNTYRKNRIALD TSTLGDGVDIDTAVQTVTPTQGAVVMADFNTRVGRRVLMTLLYRGLPVPFGAQAKMKEGGSGIVGDDGQVYLTGVPDEGD ITVNWNGKQQCVVHYRLPESAANAPVTETEQECRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 6e-147 | 45 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 4e-154 | 44 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 7e-125 | 42 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 3e-127 | 42 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 3e-127 | 42 |
| phfD | AAO17172.1 | PhfD | Virulence | tcd island | Protein | 6e-141 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_4502 | YP_008325094.1 | type 1 fimbriae anchoring protein FimD | VFG0454 | Protein | 1e-172 | 50 |
| A464_4502 | YP_008325094.1 | type 1 fimbriae anchoring protein FimD | VFG0876 | Protein | 2e-151 | 45 |
| A464_4502 | YP_008325094.1 | type 1 fimbriae anchoring protein FimD | VFG1645 | Protein | 3e-154 | 44 |
| A464_4502 | YP_008325094.1 | type 1 fimbriae anchoring protein FimD | VFG0912 | Protein | 4e-155 | 44 |
| A464_4502 | YP_008325094.1 | type 1 fimbriae anchoring protein FimD | VFG0446 | Protein | 4e-140 | 43 |
