Gene Information

Name : A464_4501 (A464_4501)
Accession : YP_008325093.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Putative fimbrial chaparone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4554770 - 4555450 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :
ATGAACAGGTATGCAGACATTTTGCTGGCGCTATTGCTGGCCGTATTTACCGTGCAGGCACAGGCCGGGATTGTCATTGG
CGGGACACGGATCATTTATAACGGCGACAAAAAAGAGACCTCCGCTTCTATACGTAACCCCGACAGATCCGGTGTTTGGC
TGGTACAGAGCTGGGTAGACAGCGGGATGAAGGGAAGTAAAACGCCGTTTATCGTCACGCCGCCGTTGTTTCGTATTAAT
CCAGGCGAAGAGAACATCCTGCGCATTGTGCGCACTGGAGGGAGCCTGCCTGAAGACCGGGAATCGGTGTTCTGGCTGAA
CGTGAAGTCCATTCCTGCCACCGACGACAGCGTGCCACATAACAACGTTCTGCAGGTGGTGGTGAAATCCCGCCTGAAAC
TCTTTTACCGCCCGGCGGGGCTGGAAGGACAGCCGGAGACGGCTTACCACCATCTGTCTGTCTCCCGTAGCGGCAATCGT
CTTACGGTCAGCAATCCCACGTCTTACTACGTCACTTTGTTCACCTTAAAGGCGGACGGGCAGGAGATTAAAGAGGCCGA
TATGGTGCCGCCGAAAGGCAGCGTCAGCTTCACGCTGCCATCGGCCACGGCGTCCACGGTGACCTGGCAGTCGATCAGTG
ATTACGGCGGCGTCAGTCAGACCGAAAGCCGCAAACTCTGA

Protein sequence :
MNRYADILLALLLAVFTVQAQAGIVIGGTRIIYNGDKKETSASIRNPDRSGVWLVQSWVDSGMKGSKTPFIVTPPLFRIN
PGEENILRIVRTGGSLPEDRESVFWLNVKSIPATDDSVPHNNVLQVVVKSRLKLFYRPAGLEGQPETAYHHLSVSRSGNR
LTVSNPTSYYVTLFTLKADGQEIKEADMVPPKGSVSFTLPSATASTVTWQSISDYGGVSQTESRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-41 45
phfC AAO17171.1 PhfC Virulence tcd island Protein 2e-39 42
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-37 41
cupD2 AAP84170.1 putative pili assembly chaperone Not tested PAPI-1 Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG0445 Protein 3e-43 44
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG0875 Protein 3e-40 43
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG0455 Protein 8e-45 42
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG1644 Protein 6e-38 41
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG0911 Protein 5e-38 41
A464_4501 YP_008325093.1 Putative fimbrial chaparone VFG0007 Protein 7e-33 41