Gene Information

Name : A464_4285 (A464_4285)
Accession : YP_008324877.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein basR/pmrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4325519 - 4326187 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATACTGATTGTTGAAGACGACACGCTATTATTACAGGGGTTAATACTCGCTGCGCAAACTGAAGGTTACGCCTG
CGATGGCGTTTCGACAGCACGTGCTGCCGAACATAGTCTGGAGTCAGGTCATTACAGTCTGATGGTGCTGGATTTAGGGT
TGCCCGATGAGGACGGCCTGCACTTTCTGGCACGGGTGCGACAGAAAAAATATACTCTGCCGGTACTCATTCTGACCGCC
CGCGATACGCTCAATGACCGCATCACCGGGCTGGACGTCGGCGCGGACGATTACCTGGTTAAACCCTTCGCCCTGGAGGA
ATTGCACGCCCGTATCCGCGCGCTGCTGCGCCGCCATAATAATCAGGGCGAAAGTGAACTGACAGTCGGCAAACTGACGC
TTAATATGGGACGGCACCAGGTCTGGATGGACGGCCAGGAGCTAACCCTGACGCCTAAAGAGTACGCCCTGCTGTCACGG
TTGATGCTCAAAGCGGGCAGCCCGGTACACCGGGAGATTCTGTATAACGATATCTACAACTGGGATAACGAACCTTCGAC
CAACACTCTGGAAGTGCATATTCATAACTTGCGTGACAAAGTCGGTAAAGCGCGCATTCGCACGGTTCGCGGGTTTGGCT
ACATGCTGGTTGCCACTGAGGAAAGCTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLARVRQKKYTLPVLILTA
RDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELTVGKLTLNMGRHQVWMDGQELTLTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVATEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-31 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_4285 YP_008324877.1 Transcriptional regulatory protein basR/pmrA BAC0487 Protein 9e-56 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_4285 YP_008324877.1 Transcriptional regulatory protein basR/pmrA VFG0473 Protein 7e-90 97
A464_4285 YP_008324877.1 Transcriptional regulatory protein basR/pmrA VFG0596 Protein 9e-23 41