Gene Information

Name : A464_4255 (A464_4255)
Accession : YP_008324848.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Putative type-1 secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4295998 - 4298064 bp
Length : 2067 bp
Strand : +
Note : -

DNA sequence :
ATGGATAAAAACTTAGAACCCTATTATTTAAGCGCAGAAACGGCATTGTCTATAGTTTCTAAAAAATTCAATATAAAGAT
TGATATCAAAGAAGATGATATCAATATCAGATTTAAAAAATACGACAGGAATAATACAGATGACTCTATACAAATGAAGA
ATTTCTTCCTGTCACTGGGACTTTCTTTACAGGATATATTATTTAGTAGCGGAGAGGATTTATTAAACGAGCCTATGCCG
ATTTTACTATTAACACCTGAAATGAAATGGATGGTGTGTGTTAGCGGCGGGCAAAAAGTAAAACTGGTCAACGCTCGAGG
GGAACTCTGTTATGTTGAGATTCCGGACGAATACTTAAAACAATTGTCGGCATTTAGTATCATGCCGTTAAATAAAGTCG
TTGATAGTATAAGAGTACAGAATATTATCAAACACTCTTTATCAATGAATAAGATTTTTTATACTAAATACTTCTTTTCG
TCTCTTTTTATGGCAATTTTTGCGTTAACTATTCCAGTATTTAGTAACTTATTCTATGATAAACTGGTTCCAAGTGCTTC
GGTCTCATCTTTGTTAGGTGTCACGATACTTGTCGCCGTGTTTATTGTTTTTGAATTTATCCTGCGAACCTCCAAAGATA
TTTATCAATCCATAACAGCAAGGCAGGATGATGTCGATATAGATATCGCATTTCTTGAGGCGGTTCTTTATAGTAAAAAG
AAAAATGGCAGATCCATGTCATCGGCATTCGTGCTGTGGAATGAGTTTCAGAAAATAAAACCCGTTTTATTAAATTCGAT
CTTTCAACGGATAGCAGATATCCCAATATTTATTATATTTCTTATTGTTATCTATATAAATTTAGGTCTGGTGGTTATTG
TTCCTGTAACTATGTTAATAATATCCATTGTTATTTCCATCGTTAACCATCATTATACCAATGAGTTGATGAATAAACAA
AAAGAAGGGCAAAAGAACAGAAATATTTTTATTTCGGAGGTCTTTTTATCTATTAAAATGATCCATACCTTAAATAATCA
GGGATTACTCTTCGATTGGGTTAACACATCAAATGAACAATCATACCTTAACCTGAAGATAAGGAAATTAAATCTTATCT
ACCAATCTATACTGGGCAGTATGTCATCTATTACCCAAATAACCATTATGGTAATAGCATTTTTTATGGTAATTAAAGGT
GATGTGACCACCGGTGCAATTGTTTCATCTGTCATTGTCTCAGGTCGTATTTCTGGCATCATTTCAAATTTTTCTTCTAC
ATTGATCTCTATCTTATCAGCAGAAAAAACAGGCAAGGATCTGCTTTCTTTTTTTGATGAAGAACAGGCAGAAAAAATGC
CAGCGCTACAATCAATATCAAAATGTCATGGCGATGTTGCCGTCCGGGGCGTGAGTTATCAGTACGATTCTCAATCTCCG
GTGATTATTAACCGTCTCTCTATCGACATACCTGCCGGGCAACGTGTCGCTGTGATAGGCGAATGTGGCGCAGGTAAAAG
CTCACTATTGGGTATGCTCTCCGGCTATCTTTCGCCAACAGATGGCGCCATCTTATATGATGGATATAACTTAGGACATT
TATCGCAAAACCTTTTCTCTCAGCATTTAAGTGTGGTGACGACACATGATGTTTTATTCACCGGAACAATTGAAAGCAAC
TTCGCGTTGAAACCGCAAAATGACAGGGGGAGGGTGCTTAAAGCGCTTCAGCTGGCGAACTGTGGTTTTATTTTACAGCA
TCCTATGGGACTGAAATTCCCGGTGAATTTTATGGCTAAAAACCTGTCATCCGGACAACAGCAGCAGCTATTATTGGCGC
GGAGCCTGAGTAGTAATGCCAGCATCTTTCTGTGGGATGAGCCCACATCAAATCTGGATGAAAATACCGAGAAGCAAATT
TTTGATAACTTAGATGAATTTATCCATGGGAAAACCCTGATCATGGTGACGCATCGTCGATATCTGATAAAGTATTTTGA
CCGGGTTCTGGTGATGAAAGGCGGAAAAATAATCCGTGATTGCTCTCCGGATAAACTATTAACGTAA

Protein sequence :
MDKNLEPYYLSAETALSIVSKKFNIKIDIKEDDINIRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFSSGEDLLNEPMP
ILLLTPEMKWMVCVSGGQKVKLVNARGELCYVEIPDEYLKQLSAFSIMPLNKVVDSIRVQNIIKHSLSMNKIFYTKYFFS
SLFMAIFALTIPVFSNLFYDKLVPSASVSSLLGVTILVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK
KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYINLGLVVIVPVTMLIISIVISIVNHHYTNELMNKQ
KEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKG
DVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEEQAEKMPALQSISKCHGDVAVRGVSYQYDSQSP
VIINRLSIDIPAGQRVAVIGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNLFSQHLSVVTTHDVLFTGTIESN
FALKPQNDRGRVLKALQLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSNASIFLWDEPTSNLDENTEKQI
FDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCSPDKLLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siiF CAE11798.1 putative type-I secretion protein (putative inner membrane component) Virulence SPI-4 Protein 0.0 96
STY4460 NP_458560.1 putative type-1 secretion protein Not tested SPI-4 Protein 0.0 96
STM4262 NP_463127.1 ABC-type bacteriocin/lantibiotic exporter Not tested SPI-4 Protein 0.0 96
SC4141 YP_219128.1 bacteriocin/lantibiotic ABC transporter Not tested SPI-4 Protein 0.0 96
spi4_R AAC26655.1 ltkB homolog Virulence SPI-4 Protein 0.0 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_4255 YP_008324848.1 Putative type-1 secretion protein VFG0582 Protein 0.0 96