Gene Information

Name : A464_4252 (A464_4252)
Accession : YP_008324845.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Agglutination protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4276678 - 4277997 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATTAAGATACTTTTTCTGACGACTGCTTTTGCCATGCAAAGCGTTTATGCTGACGAGTTACCTGTAATTCCTCT
CAGTGATTTAGTTAATGCTGCATTAAAACATCAGCCTTCTGTTGCTGTTTCGTATTATGAAACTGAAAAGAAAAATAGTG
ATTTAGATGCTACAAGAGCGGCTCTTTATCCTACGTTGGATCTGACGTCTGGTTTTAATAATAACAGGAAAGAGTCCTCA
AACACTGAAAGAAACATTGAAAATAAAATATCTTTATCATATCGGATTACGGATTTTGGAGTAACAGGTGCCAATATTAG
AAAATCTGAATATGAAAGAGATAATAGTAAAACTGATTATGAAAAAACAAAAAATATCGTCTCACAGGACGTTGCGACAA
CCTATTACAATATTAGTAAATATCGTGAGATGATTGAGGGTGTAAACCAGGAGAAAGAGTTCTATAAAAAGATGCTGGAA
AATTTCTCACTGCTGGTTTCTTCTGGTGTCGCTATGCAGTCAGATATGCGTAAGGTGCAGGTCTCTATCGATGCCTTGAA
TACCCGAAGCATTATGTATCAGTCCATGCTGGACGATGAAATGTATAAAATGCAAAATATGACGGGTCTGAATTTATCAT
CCGGACAGATTCAAAGTGATGAAAAATTCAACCTCTTCAAAAAATATTCTTTTATAGAAAGTCCTGAAAAGCTTATGGAC
ATGATTATGAAATATAATGATGACTATAAGATGCTCGTTAATACCCGCAAAGCTGCAACTGAAGATATTAATGCCGCAAA
ATCCTCCTATTTCCCAACTGTAGATCTCGTTTCTAGTTATGTACAGAATAATCCAGGCGGTGCAGCTAAAAAAAGTGATT
ATGAAGATGAATTCAAAACAGGTATAAATGTCAGCTTCAACCTTTTTAATGGCTTTAGAAACGCAGCCCAGGAAAGGAAA
ATGGTAGCAAGTTACTCACAGGCTAAACTACAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGACTCCCAGCT
TTCCAGATATAGTGCAGCGAAAGAAACATACGCTGTAGCTGAGCGTTCACATTTAAACGCTTTACAGCTTACAGAATTAT
ATGAGCAGGAGTTTCAGTTAGGTCAGAAAAGTTTGCTGGATTTAATTTCTAGTCGAAATGAAGCATTTCAGGCATATATA
AGCATGGTTGATAGTAAATATAGTTTGTATATGCTGAAACTACAGCAGCTCTCATTGGTTTTTCATTTAATGGATTATTT
AAAAGGAAGTGCTGTAAGTGAGCTGAACGGAATGAAATGA

Protein sequence :
MKIKILFLTTAFAMQSVYADELPVIPLSDLVNAALKHQPSVAVSYYETEKKNSDLDATRAALYPTLDLTSGFNNNRKESS
NTERNIENKISLSYRITDFGVTGANIRKSEYERDNSKTDYEKTKNIVSQDVATTYYNISKYREMIEGVNQEKEFYKKMLE
NFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSSGQIQSDEKFNLFKKYSFIESPEKLMD
MIMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPGGAAKKSDYEDEFKTGINVSFNLFNGFRNAAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSRYSAAKETYAVAERSHLNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYI
SMVDSKYSLYMLKLQQLSLVFHLMDYLKGSAVSELNGMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4456 NP_458556.1 putative type-I secretion protein Not tested SPI-4 Protein 0.0 91
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 0.0 91
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 0.0 91
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 0.0 91
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 0.0 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_4252 YP_008324845.1 Agglutination protein VFG0579 Protein 0.0 91