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Name : A464_3923 (A464_3923) Accession : YP_008324517.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : type 1 fimbriae anchoring protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 3908845 - 3911370 bp Length : 2526 bp Strand : - Note : - DNA sequence : ATGATTCGCTTGCGTTTTTATCTCGCGCTGGCTTCGGGGGCCCTGTTAAGTTTCGCGACTCAAACGATGGCCAGAGATAG CCTGTTTAACCCCAGTCTTCTGGAAATTGACCATCCTGTCGATGTGGATATTCATCAGTTTAACCGTGCGAATATGTTGC CGCCAGGTGATTATAAAGTCGATATTATTATTAACGACAAATTCTTTGAGAAGCGGGACGTTAAGTTTGTCCAGGATAAA CCGGATGCGGAACTACACCCCTGCTTTGTTGCGGTTAAAGAGGTTTTATCTTCGTATGGTGTCAAGGTTGATGCCTTAAA AGCATTACAGAATGTGGATAGTCAGGCCTGTCTGAATCCTGCGCCATTTATCGATGGTTCAATCTGGACATTTGATTCGA ATAAATTTGTGCTCAATATTTCGATTCCGCAGATTTATTTGGATACGGCAGCCTATGGCTATATCAGCCCGTCGCGTTGG GATGAGGGCATTAACGCGATGATGGTCAACTATGATTTTTCCGGGACGCATACGGTTAAATCGAATCACGATATTGGGGA AGATGATACGTATTATCTGAACTTGCGTAACGGGATTAATCTGGGGGCCTGGCGAGTGCGTAACTACAGTACGCTGAACG CGACGGGCAGCGATACGGAATATCACTCTATCAGTAGCTATATCCAGCGAGACATTGCCGCATTACGTAGCCAGATCATG GTTGGCGATACCTGGACGGCGAGCGATGTGTTCGATAGTACTCAGATCCGTGGCGTCAGGCTGTATACCGACGACGATAT GTTGCCGTCAAGCCTGAATGGCTTTGCCCCGATAGTGCGCGGGGTGGCGAAGAGTAACGCAACAGTAATCATCCGGCAAA ATAAATACGTGATTTATCAATCTGCAGTGCCGCAGGGCGCGTTTGAAATCACCGACCTGAATACGGTAAGCGGTGGTGGC GATCTCGATGTCACCATTAAAGAAGAAGACGGTAGCGAGCAGCACTTTACTCAGCCGTATGCGTCGCTGGCGATTCTGAA ACGTGAGGGACAGACTGACCTTGATATGAGTGTCGGCGAGCTGCGGGATGAAAACAGCTTCACCCCTAATGTTGTTCAGG CGCAGGTATTACACGGTTTGCCGTGGGGATTAACGCTGTATGGCGGAACGCAGATTGCGGAGGATTATGCCGCCGCCGCC TTCGGTATGGGCAAAGATATGGGGTCATTCGGGGCGATGTCGCTGGATGTGACTCATGCGCGTTCGCATTTTAACGATGG CGATGATGAAAACGGCCAGTCCTGGCGTTTTCTCTATTCCAAACGTTTTGATGATACCGATACCAATTTTCGCCTCGTGG GATACCGTTATTCAACTGAAGGATTCTACTCTCTCAGTGAGTGGGCATCGCGCCAGGATAATGGTTCTGACTTCTGGGTG ACGGGCAACCGGCGTAGCCGCGTTGAAGGCACCTGGACGCAGTCATTTGGCCGCGACTGGGGGAATATTTATCTGACCAT CAGCCGTCAGCAATACTGGCAGACAGATGAAGTGGAACGCCTGGTACAGCTGGGTTATAGCAATACCTGGCGGCAAGTAT CATGGAACGTATCGTGGAACTACACCGATTCCATCAATCGTTATTCCGGTAATAAGTACTATAACGATGATAATGACGAT GATAACAACCACGAACATATCTTCATGCTTTCGGTCTCTATACCGCTTTCCGGCTGGCTGGATAGCAGCTACGTCAACTA TTCGATGACGCAAAATAACCATAACGAAAGCTCAATGCAGGCGGGAATCGGCGGTACGTTGCTGGAAGGACACAATCTTT CTTATAACGTCCAGGAATCGTGGGATAGCTCGCCAGAAGATGTCTATAGCGGCAACGCCAGTATGGAATACAACGGCACC TATGGTGCGGTGAACGGCAGCTATGCCTGGAGCCGCGATTCGCAACGCCTGAACTACGGCGCACGCGGCGGCATCCTGGT GCATAGCGGCGGCATTACCTTCTCGCAGGAACTGGGCGAAACCGTGGCGTTAGTCGAAGCGCCGGGCGCCGGCGGTTTAT CGGTAGAGAACGCCACCGGGGTTTCCACTGACTGGCGCGGATACACGGTAAAAACCCAGCTTAACCCGTATGATGAGAAC CGGGTGGCAATAAACAGTAATTATTTTGCCAAAGCCAATATTGAACTGGATAACACGGTAGTGAATCTGGTGCCAACACG CGGCGCGGTCGTCAAAGCGGCGTTTGTTACCCATGTGGGCTATCGCGTGCTGTTTAACGTTAATCAAGGCAACGGTAAGC CAGTCCCCTTTGGGGCGATGGCGACGGCGGAGCTGGATTCTGGAACAGTCACCGGAATTGTTGGTGATAATGGCGAACTC TATTTATCCGGAATGCCGGAAAAGGGGCAATTTATCGTTTCCGGACAAAATACATGTATTGTTGATTATCATCTTGCTGA ACAGAAAGATAATGAGCTCATACAAATCCCCGTCATTTGTAAGTGA Protein sequence : MIRLRFYLALASGALLSFATQTMARDSLFNPSLLEIDHPVDVDIHQFNRANMLPPGDYKVDIIINDKFFEKRDVKFVQDK PDAELHPCFVAVKEVLSSYGVKVDALKALQNVDSQACLNPAPFIDGSIWTFDSNKFVLNISIPQIYLDTAAYGYISPSRW DEGINAMMVNYDFSGTHTVKSNHDIGEDDTYYLNLRNGINLGAWRVRNYSTLNATGSDTEYHSISSYIQRDIAALRSQIM VGDTWTASDVFDSTQIRGVRLYTDDDMLPSSLNGFAPIVRGVAKSNATVIIRQNKYVIYQSAVPQGAFEITDLNTVSGGG DLDVTIKEEDGSEQHFTQPYASLAILKREGQTDLDMSVGELRDENSFTPNVVQAQVLHGLPWGLTLYGGTQIAEDYAAAA FGMGKDMGSFGAMSLDVTHARSHFNDGDDENGQSWRFLYSKRFDDTDTNFRLVGYRYSTEGFYSLSEWASRQDNGSDFWV TGNRRSRVEGTWTQSFGRDWGNIYLTISRQQYWQTDEVERLVQLGYSNTWRQVSWNVSWNYTDSINRYSGNKYYNDDNDD DNNHEHIFMLSVSIPLSGWLDSSYVNYSMTQNNHNESSMQAGIGGTLLEGHNLSYNVQESWDSSPEDVYSGNASMEYNGT YGAVNGSYAWSRDSQRLNYGARGGILVHSGGITFSQELGETVALVEAPGAGGLSVENATGVSTDWRGYTVKTQLNPYDEN RVAINSNYFAKANIELDNTVVNLVPTRGAVVKAAFVTHVGYRVLFNVNQGNGKPVPFGAMATAELDSGTVTGIVGDNGEL YLSGMPEKGQFIVSGQNTCIVDYHLAEQKDNELIQIPVICK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 0.0 | 68 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 0.0 | 67 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_3923 | YP_008324517.1 | type 1 fimbriae anchoring protein FimD | VFG0454 | Protein | 1e-147 | 42 |
