Gene Information

Name : A464_3208 (A464_3208)
Accession : YP_008323802.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Two-component system response regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3193078 - 3193737 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGAATTTTACTGGTAGAAGACGACACACTTATCGGCGATGGTATAAAAGCGGGTCTAAGTAAAATGGGATTCAGCGT
CGACTGGTTTACTGAGGGTCGCCCGGGCAAGGAGGCGCTTTACAGCGCGCCTTATGATGCGGTTATTTTAGATTTGACCC
TACCAGGCATGGACGGACGGGATATTTTGCGCGAATGGCGTGAAAAGGGAAAACAAGAACCCGTGCTGATCCTCACAGCG
CGCGACGCGTTAGCAGAGCGCGTCGAGGGGCTGCGTCTGGGTGCCGATGACTATTTATGTAAACCTTTTGCGCTCATTGA
GGTCGCCGCCCGTCTGGAGGCGCTGATACGCCGTGCCAGCGGCCAGGCGAGTAGCGAACTGCGGCACGGTCAGGTTACGC
TTAATCCGGGCAATCTGATCGCAACACTTGCCGACGAACCTTTAACCCTGAAACCGAAAGAGTTCGCGTTGCTGGAATTG
TTAATGCGTAACAAAGGTCGCGTGTTGCCGCGCAAGCTTATTGAAGAGAAACTGTATAACTGGGACGACGATGTCTCCAG
TAATGCGGTGGAAGTCCATGTTCATCATTTACGCCGTAAGCTCGGCAGCGAATTTATTCGCACCGTACACGGTATTGGCT
ACACCCTGGGTGAGGCATGA

Protein sequence : 
MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGKQEPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALIRRASGQASSELRHGQVTLNPGNLIATLADEPLTLKPKEFALLEL
LMRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0487 Protein 3e-40 46
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0308 Protein 7e-35 42
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0638 Protein 8e-30 42
A464_3208 YP_008323802.1 Two-component system response regulator QseB NC_002516.2.879194.p Protein 5e-30 41
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0347 Protein 5e-33 41
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0083 Protein 4e-35 41
A464_3208 YP_008323802.1 Two-component system response regulator QseB BAC0197 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_3208 YP_008323802.1 Two-component system response regulator QseB VFG0473 Protein 9e-40 47
A464_3208 YP_008323802.1 Two-component system response regulator QseB VFG1390 Protein 1e-31 42