Gene Information

Name : A464_292 (A464_292)
Accession : YP_008320888.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Toxin co-regulated pilus biosynthesis protein anchors TcpT to membrane
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 312338 - 313312 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACTCGGGTATTCCATTATATGATTCTATTCAGAAATTACGTGATGAAGGAAAAGGACTTCTTGGAAAAGGGTT
TATTGGAAAGTTAGATCTTATCAGTAACCGGATGGCTGAAAGCGAATCAGTCAATGCTGTGTTTGCTGGTCTTGTACCTA
AAGACGAACTCAGCGTAATCTTTTCTTCTGAGAAAAGTGGTTCGTTGTCAAGCGGATTTCGGGGCATTGCGGAAATGATT
AATTATCGCAAAGAGCTAACCTCCAGTATAGCTAAAGCAGTATCTTTTCCATTGATTATGCTGGTTCTCGCGCTGGTTGT
GATTTCAGGCTATGCAGTTAAAGTATTTCCTGCATTTGAACGGGTGGTACCTACGCAGCGATGGCCGACTGTTACGCAAG
TATTATATAGTTTTGGTTCATCGCTATATAACGGGTTATGGATTTATTTTCTGATATTTTTTATAGCTGCGTATATAATA
ATCGTTTTACTCTTAAATAACCTTACAGGTAATTTACGCAATAATGTTCTGGATCGTATCATACCTTTCTCAATTTATAA
AAAAATGGTCTGCTCTGTGTTTATCAGTAATCTTTCATCAATGCTCAAAAACAAAGTGCCGATTAACGATAGTTTGACTG
TACTGAGTCAGAATGCTAACCGATGGCTTTATGCGCATATCAACACAATGTTAGATAATATGGCTCGTGGGGATACCTAT
AAAGATGCGCTTAATACAGGATTACTCGGAAAAGAAGAAATTCTGAATGTCAGTATTTATTCTGGTCTACCATCATTTTC
AGATGTTCTGGCTGCAGTGGCTCTCAAGGCTCGAAAAGATCTGGCTCAGGCAATATCGCGGTTATCAGGGCTACTGAAAT
CATTGTCAACACTGGTTCTGGGCGGATGTGTAGTATGGGTGTTCGTCGCATTATTTGCGTTGTCTGATACATTATCAAAA
ATGACCAGTTTCTGA

Protein sequence : 
MIDSGIPLYDSIQKLRDEGKGLLGKGFIGKLDLISNRMAESESVNAVFAGLVPKDELSVIFSSEKSGSLSSGFRGIAEMI
NYRKELTSSIAKAVSFPLIMLVLALVVISGYAVKVFPAFERVVPTQRWPTVTQVLYSFGSSLYNGLWIYFLIFFIAAYII
IVLLLNNLTGNLRNNVLDRIIPFSIYKKMVCSVFISNLSSMLKNKVPINDSLTVLSQNANRWLYAHINTMLDNMARGDTY
KDALNTGLLGKEEILNVSIYSGLPSFSDVLAAVALKARKDLAQAISRLSGLLKSLSTLVLGGCVVWVFVALFALSDTLSK
MTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0836 NP_230484.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 2e-48 41
tcpE YP_001216317.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 2e-48 41
tcpE AAK20763.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 1e-48 41
tcpE AAK20793.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 1e-48 41
tcpE CAA45463.1 - Virulence VPI Protein 1e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_292 YP_008320888.1 Toxin co-regulated pilus biosynthesis protein anchors TcpT to membrane VFG0099 Protein 8e-49 41