Gene Information

Name : A464_291 (A464_291)
Accession : YP_008320887.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 310771 - 312300 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGATTTATTATGACTTTCTTCACCTTGATAATGGAGACTTATTATCAGACTGGCAATTCAGCCTTAAAGAGGAGGAACT
GCTGGTCGGTGAGCATAATGGCATATTCAGTCTGATGGTTCACCAGTTGAATATGAACGATCTCGCTGAAATTCAGCAAA
GTATCCTATATCTGAATCTCTGCTGTGATATTGATATTAGTCGCATAGTATTAATAAAGGACAACCTTTATTATAGTATC
TTTGAAAGACTCGTTAAAAAGAATTTTTCTGTCAGAGAAGGTGTCGTCAGTACGGTACAAGCAGATCTCGAGAGATTGTT
ACAGATGGCTGTGGATGCCGGGGCCAGTGATCTTCATATTACCCGAAACGATCAGCTTGCCAGTGTAGAGTTCAGGGTAA
ATGGTGTCCTGGTCCCGCATTCAAAGATTCTGTCTTCAAAATGTGATGAACTTTGTTTTGTGCTTTACAACGTACAGGCT
TCGACAAAAGAGACAACCTGGAACCGTTCTGTTCCCCAGAGTGCCAATATTTTATATTCTCTGGGAGGAAAAAGCTTTCG
TTTCCGGTATGCACATTTTCCGATCTTTGGTGAGACGACATCATGTTATCACTGTGTACTTCGTATTATTCCCGCTGGCA
TCAGTAACTCGACGATCCCTTCTCTGGAAAAGTTGGGGGTTTCTGGTGACGAGGTTGAAGATATTAAGAGAGTTCTGAGT
AACCCCTATGGTGTTTACGTGGTTGCAGGTACGACAGGATCAGGGAAATCAACTACGCTGAAAAACTTGATGGAGTGGCT
ACAGAAAAACCGTTATTCAGGTAAAGGTTGCTTTCTGACAATTGAAGATCCGGTGGAATATCAGATTTGGGGGGCTAAAC
AAAGTTCTGTACTGGATGTGGATGGTGGGGGATTCCATTCAGCAATTAAGTCTGCGCTCCGTCGCGATCCTGATGTATTG
ATGGTTGGGGAGATCAGGGATAATATTTCTGCTAATGCCCTGGCGGGGGCTGTAGAAAGCGGTCATTACTGTTTTACTAC
TGTTCATGCCGGGAATATTGTTACGCTATTACAGCGTCTCGTTGCGCTGGGTGTTTCATCAGATAAGTTATCCACCCCTG
GATTTATTGCCGGATTGCAATGCCAAAAATTGTTACCGGTACTCTGCCATCATTGTAAAAAAGAAAATAATCATACTGTG
TTGGGAAGACATTTTCCTGTCTTTATACTGAATGAAGAAGGATGCGAACATTGTTTTTATACCGGTCTGAAGAGCAGGCA
ACTGGTAATCGAATATATGCGCCCCACGTACGATGAGCTGAAAGCAATTGCTGAAAGTCACTGGCTGGAAGCATATACGA
TCTGGAGGAAAAAACGTTTTACAACCAGTGGAATTGCTGAAGGGTTTGACCTGAAAGAAAAGGCTTTTCATCATGTTCTC
AAGGGAAATGTCTGTGCTTCCTGGTTCAGTATGGAGTTTGGTAAAGTTGAGGAAAAAGATCTGGAGGTACTAATTGAGAA
AGCTTACTAA

Protein sequence :
MIYYDFLHLDNGDLLSDWQFSLKEEELLVGEHNGIFSLMVHQLNMNDLAEIQQSILYLNLCCDIDISRIVLIKDNLYYSI
FERLVKKNFSVREGVVSTVQADLERLLQMAVDAGASDLHITRNDQLASVEFRVNGVLVPHSKILSSKCDELCFVLYNVQA
STKETTWNRSVPQSANILYSLGGKSFRFRYAHFPIFGETTSCYHCVLRIIPAGISNSTIPSLEKLGVSGDEVEDIKRVLS
NPYGVYVVAGTTGSGKSTTLKNLMEWLQKNRYSGKGCFLTIEDPVEYQIWGAKQSSVLDVDGGGFHSAIKSALRRDPDVL
MVGEIRDNISANALAGAVESGHYCFTTVHAGNIVTLLQRLVALGVSSDKLSTPGFIAGLQCQKLLPVLCHHCKKENNHTV
LGRHFPVFILNEEGCEHCFYTGLKSRQLVIEYMRPTYDELKAIAESHWLEAYTIWRKKRFTTSGIAEGFDLKEKAFHHVL
KGNVCASWFSMEFGKVEEKDLEVLIEKAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpT AAK20792.1 toxin-coregulated pilus biosynthesis protein T Virulence VPI Protein 9e-90 47
tcpT YP_001216316.1 toxin co-regulated pilus biosynthesis protein T Virulence VPI-1 Protein 1e-89 47
VC0835 NP_230483.1 toxin co-regulated pilus biosynthesis protein T Virulence VPI-1 Protein 1e-89 47
tcpT AAK20762.1 toxin-coregulated pilus biosynthesis protein T Virulence VPI Protein 1e-89 47
tcpT CAA45462.1 - Virulence VPI Protein 1e-89 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_291 YP_008320887.1 Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA VFG0098 Protein 5e-90 47