|
Name : A464_291 (A464_291) Accession : YP_008320887.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA Function : - COG functional category : - COG ID : - EC number : - Position : 310771 - 312300 bp Length : 1530 bp Strand : + Note : - DNA sequence : ATGATTTATTATGACTTTCTTCACCTTGATAATGGAGACTTATTATCAGACTGGCAATTCAGCCTTAAAGAGGAGGAACT GCTGGTCGGTGAGCATAATGGCATATTCAGTCTGATGGTTCACCAGTTGAATATGAACGATCTCGCTGAAATTCAGCAAA GTATCCTATATCTGAATCTCTGCTGTGATATTGATATTAGTCGCATAGTATTAATAAAGGACAACCTTTATTATAGTATC TTTGAAAGACTCGTTAAAAAGAATTTTTCTGTCAGAGAAGGTGTCGTCAGTACGGTACAAGCAGATCTCGAGAGATTGTT ACAGATGGCTGTGGATGCCGGGGCCAGTGATCTTCATATTACCCGAAACGATCAGCTTGCCAGTGTAGAGTTCAGGGTAA ATGGTGTCCTGGTCCCGCATTCAAAGATTCTGTCTTCAAAATGTGATGAACTTTGTTTTGTGCTTTACAACGTACAGGCT TCGACAAAAGAGACAACCTGGAACCGTTCTGTTCCCCAGAGTGCCAATATTTTATATTCTCTGGGAGGAAAAAGCTTTCG TTTCCGGTATGCACATTTTCCGATCTTTGGTGAGACGACATCATGTTATCACTGTGTACTTCGTATTATTCCCGCTGGCA TCAGTAACTCGACGATCCCTTCTCTGGAAAAGTTGGGGGTTTCTGGTGACGAGGTTGAAGATATTAAGAGAGTTCTGAGT AACCCCTATGGTGTTTACGTGGTTGCAGGTACGACAGGATCAGGGAAATCAACTACGCTGAAAAACTTGATGGAGTGGCT ACAGAAAAACCGTTATTCAGGTAAAGGTTGCTTTCTGACAATTGAAGATCCGGTGGAATATCAGATTTGGGGGGCTAAAC AAAGTTCTGTACTGGATGTGGATGGTGGGGGATTCCATTCAGCAATTAAGTCTGCGCTCCGTCGCGATCCTGATGTATTG ATGGTTGGGGAGATCAGGGATAATATTTCTGCTAATGCCCTGGCGGGGGCTGTAGAAAGCGGTCATTACTGTTTTACTAC TGTTCATGCCGGGAATATTGTTACGCTATTACAGCGTCTCGTTGCGCTGGGTGTTTCATCAGATAAGTTATCCACCCCTG GATTTATTGCCGGATTGCAATGCCAAAAATTGTTACCGGTACTCTGCCATCATTGTAAAAAAGAAAATAATCATACTGTG TTGGGAAGACATTTTCCTGTCTTTATACTGAATGAAGAAGGATGCGAACATTGTTTTTATACCGGTCTGAAGAGCAGGCA ACTGGTAATCGAATATATGCGCCCCACGTACGATGAGCTGAAAGCAATTGCTGAAAGTCACTGGCTGGAAGCATATACGA TCTGGAGGAAAAAACGTTTTACAACCAGTGGAATTGCTGAAGGGTTTGACCTGAAAGAAAAGGCTTTTCATCATGTTCTC AAGGGAAATGTCTGTGCTTCCTGGTTCAGTATGGAGTTTGGTAAAGTTGAGGAAAAAGATCTGGAGGTACTAATTGAGAA AGCTTACTAA Protein sequence : MIYYDFLHLDNGDLLSDWQFSLKEEELLVGEHNGIFSLMVHQLNMNDLAEIQQSILYLNLCCDIDISRIVLIKDNLYYSI FERLVKKNFSVREGVVSTVQADLERLLQMAVDAGASDLHITRNDQLASVEFRVNGVLVPHSKILSSKCDELCFVLYNVQA STKETTWNRSVPQSANILYSLGGKSFRFRYAHFPIFGETTSCYHCVLRIIPAGISNSTIPSLEKLGVSGDEVEDIKRVLS NPYGVYVVAGTTGSGKSTTLKNLMEWLQKNRYSGKGCFLTIEDPVEYQIWGAKQSSVLDVDGGGFHSAIKSALRRDPDVL MVGEIRDNISANALAGAVESGHYCFTTVHAGNIVTLLQRLVALGVSSDKLSTPGFIAGLQCQKLLPVLCHHCKKENNHTV LGRHFPVFILNEEGCEHCFYTGLKSRQLVIEYMRPTYDELKAIAESHWLEAYTIWRKKRFTTSGIAEGFDLKEKAFHHVL KGNVCASWFSMEFGKVEEKDLEVLIEKAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpT | AAK20762.1 | toxin-coregulated pilus biosynthesis protein T | Virulence | VPI | Protein | 1e-89 | 47 |
| tcpT | CAA45462.1 | - | Virulence | VPI | Protein | 1e-89 | 47 |
| tcpT | AAK20792.1 | toxin-coregulated pilus biosynthesis protein T | Virulence | VPI | Protein | 9e-90 | 47 |
| tcpT | YP_001216316.1 | toxin co-regulated pilus biosynthesis protein T | Virulence | VPI-1 | Protein | 1e-89 | 47 |
| VC0835 | NP_230483.1 | toxin co-regulated pilus biosynthesis protein T | Virulence | VPI-1 | Protein | 1e-89 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_291 | YP_008320887.1 | Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA | VFG0098 | Protein | 5e-90 | 47 |
