Gene Information

Name : A464_2923 (A464_2923)
Accession : YP_008323517.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Type III secretion thermoregulatory protein (LcrFVirFtranscription regulation of virulence plasmid)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2909626 - 2910306 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGGCTGGTTCTACACAGAAGCTGCATATGTCATTTTCTGAGGGCCGGCATGATGAGTTTTGTCCGGTTCAGGAAGG
CGCCCTGCTTTTTATCGAGCAGGCTGTTGTCGCACCAGTATCAGGAGACCTGCTGTTTCGACCGTTAAAAATTGAAATAC
TCAGCAAATTGCTGGCGTTTATTGATGGTGCCGGGTTGATGGATACGGCATACGCTGAACATGATAAATGGGTTTTGCTG
AGCCCCGAGTTTCGTGCTATCTGGCAGGATCGTAAACGCTGTGAGTATTGGTTTTTGCAGCAAATTATTACACCTTCTCC
GGCTTTCAATAAAATATTATCGCTTTTGCGAAAAAGCGAGAGTTACTGGTTAGTCGGCTATTTACTCGCTCAGTCCACCA
GCGGCAGTACAATGAGAATGCTGGGAGAAGACTATGGCGTTTCTTATACCCACTTTCGTCGTTTGTGCAGCAGGGCATTA
GGCGGTAAAGCGAAGAGTGAATTACGAAACTGGCGTATGGCGCAATCGCTGCTGGAAAGCGTAGAAGGACACGAGAATAT
CACGAAATTAGCCGTCAATAATGGCTACTCATCGCCTTCACATTTCTCTAATGAGATCAAAGAGCTGATCGGCGTTTCGC
CGCGGAAATTATCAAATATTATTCAATTGGCAGACAAATGA

Protein sequence : 
MQAGSTQKLHMSFSEGRHDEFCPVQEGALLFIEQAVVAPVSGDLLFRPLKIEILSKLLAFIDGAGLMDTAYAEHDKWVLL
SPEFRAIWQDRKRCEYWFLQQIITPSPAFNKILSLLRKSESYWLVGYLLAQSTSGSTMRMLGEDYGVSYTHFRRLCSRAL
GGKAKSELRNWRMAQSLLESVEGHENITKLAVNNGYSSPSHFSNEIKELIGVSPRKLSNIIQLADK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invF NP_457293.1 possible AraC-family regulatory protein Virulence SPI-1 Protein 6e-93 92
invF NP_806502.1 AraC family transcriptional regulator Virulence SPI-1 Protein 6e-93 92
invF NP_461820.1 invasion regulatory protein Virulence SPI-1 Protein 6e-93 92
invF YP_217818.1 invasion protein Virulence SPI-1 Protein 3e-96 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2923 YP_008323517.1 Type III secretion thermoregulatory protein (LcrFVirFtranscription regulation of virulence plasmid) VFG0560 Protein 2e-93 92