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Name : A464_2920 (A464_2920) Accession : YP_008323514.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA Function : - COG functional category : - COG ID : - EC number : - Position : 2904741 - 2906798 bp Length : 2058 bp Strand : - Note : - DNA sequence : GTGCTGCTTTCTCTACTTAACAGTGCTCGTTTACGACCTGAATTACTGATTCTGGTACTAATGGTGATGATCATTTCTAT GTTCGTCATCCCATTACCTACCTTTCTGGTTGATTTCCTGATCGCACTGAATATCGTGCTGGCGATATTAGTGTTTATGG GGTCGTTCTACATTGACAGAATCCTTAGCTTTTCAACATTTCCTGCGGTACTGTTAATTACAACGCTCTTTCGTCTGGCA TTATCGATCAGTACCAGCCGTCTTATTTTGATTGAAGCTGATGCCGGGGAAATTATCGCCACATTCGGGCAATTCGTTAT TGGCGATAGCCTGGCGGTGGGGTTTGTTGTCTTTTCTATTGTTACTGTCGTTCAGTTTATCGTTATTACAAAAGGTTCAG AGCGTGTCGCTGAAGTTGCGGCCCGTTTTTCTCTGGATGGTATGCCCGGTAAACAGATGAGTATTGATGCCGATCTGAAA GCCGGTATTATTGATGCGGATGCCGCGCGTGAACGGCGAAGCGTACTGGAAAGAGAAAGTCAGCTTTACGGTTCTTTTGA CGGTGCGATGAAGTTTATCAAAGGTGATGCCATCGCAGGCATTATTATCATCTTTGTGAACTTTATTGGTGGTATTTCGG TGGGGATGACCCGCCATGGCATGGATTTATCTACCGCACTATCTACTTATACCATGTTGACCATCGGTGATGGTCTTGTC GCCCAGATCCCTGCACTGCTGATTGCGATTAGTGCTGGTTTTATCGTGACTCGCGTAAATGGCGATAGCGATAATATGGG GCGTAACATTATGATGCAGCTGTTGAACAACCCATTTGTATTGGTTGTCACGGCTATTCTGACCATTTCAATGGGTACTC TGCCGGGATTCCCGCTGCCGGTATTTGTCATTTTGTCGGTAGTTTTAGGCGTACTTTTCTATTTTAAGTTCCGTGAAGCG AAACGTAGCGCAGGCGCGCCCAAAACCAGCAAAGGCGAGCAGCCGCTTAGTATTGAGGAAAAAGAGGGGACATCGTTAGG ACTGATTGGCGATCTCGATAAAGTTTCCACTGAGACTGTTCCATTGATATTGCTTGTGCCGAAGAGTCGACGCGAGGATC TGGAAAAAGCACAGCTTGCGGAGCGCCTGCGGAGTCAGTTCTTTATTGACTATGGCGTACGACTGCCAGAAGTATTATTA CGAGATGGTGAGGGACTGGACGATAACAGCATCGTATTGTTGATTAATGAGATCCGCGTTGAACAATTTACGGTCTATTT TGATTTAATGCGAGTGGTAAATTATTCCGATGAAGTTGTTACCTTTGGCATTAATCCAACGACTCACCAGCAAGGTAGCA GCCAGTATTTTTGGGTAACGTACGAAGAAGGGGAAAAACTTCGGGAACTTGGATATGTATTGCGGAATGCGCTTGACGAG CTTTATCACTGTCTGGCGGTAACTCTGGCGCGCAACGTTAATGAGTATTTTGGTATTCAGGAAACAAAACATATGCTGGA TCAGCTGGAGGCAAAATTTCCTGACTTACTTAAAGAAGTTCTCAGGCATGCCACGGTACAACGTATCTCTGAAGTTTTAC AGCGCTTGTTAAGCGAACGTGTTTCCGTGCGTAATATGAAATTAATTATGGAAGCGCTCGCATTGTGGGCGCCAAGAGAA AAAGATGTCATTAACCTGGTGGAACATATTCGTGGAGCCATGGCACGTTATATCTGCCATAAATTCGCCAATGGCGGAGA ATTACGAGCAGTAATGGTGTCTGCCGAAGTTGAGGATATTATTCGTAAAGGTATTCGCCAGACTTCTGGCAGCACCTTCC TCAGTCTTGAACCGGATGCCTCCGCTAATTTGATGGATCTCATTACGCTTAAGCTGGATGATTTGTTGATTGCACATAAA GATCTTGTCCTCCTTACGTCTGTTGATGTCCGTCGTTTTATTAAGAAAATGATTGAAGGTCGTTTTCCGGATTTGGAGGT TTTATCTTTCGGCGAGATAGCAGATAGCAAGTCAGTGAATGTAATAAAAACGATATAA Protein sequence : MLLSLLNSARLRPELLILVLMVMIISMFVIPLPTFLVDFLIALNIVLAILVFMGSFYIDRILSFSTFPAVLLITTLFRLA LSISTSRLILIEADAGEIIATFGQFVIGDSLAVGFVVFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK AGIIDADAARERRSVLERESQLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTRHGMDLSTALSTYTMLTIGDGLV AQIPALLIAISAGFIVTRVNGDSDNMGRNIMMQLLNNPFVLVVTAILTISMGTLPGFPLPVFVILSVVLGVLFYFKFREA KRSAGAPKTSKGEQPLSIEEKEGTSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLAERLRSQFFIDYGVRLPEVLL RDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVTFGINPTTHQQGSSQYFWVTYEEGEKLRELGYVLRNALDE LYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPRE KDVINLVEHIRGAMARYICHKFANGGELRAVMVSAEVEDIIRKGIRQTSGSTFLSLEPDASANLMDLITLKLDDLLIAHK DLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 0.0 | 65 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 2e-173 | 64 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 4e-151 | 55 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 5e-102 | 42 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 2e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG0557 | Protein | 0.0 | 99 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG1006 | Protein | 3e-179 | 64 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG2461 | Protein | 3e-149 | 57 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG1780 | Protein | 2e-151 | 54 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG0064 | Protein | 5e-101 | 44 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG0384 | Protein | 2e-105 | 43 |
| A464_2920 | YP_008323514.1 | Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA | VFG0198 | Protein | 5e-98 | 42 |
