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Name : A464_2913 (A464_2913) Accession : YP_008323507.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 2899735 - 2899995 bp Length : 261 bp Strand : - Note : - DNA sequence : ATGGATGATTTAGTGTTTGCAGGTAATAAGGCGCTCTATCTTGTTCTGATCCTTTCAGGATGGCCGACGATTGTCGCAAC GGTTATCGGCCTGCTGGTTGGATTATTCCAGACGGTAACGCAATTACAGGAACAAACGCTGCCTTTTGGTATTAAGTTAC TTGGCGTGTGTTTATGTCTGTTCTTACTGTCTGGCTGGTATGGCGAAGTTTTACTCTCTTACGGGCGTCAGGTGATATTT CTGGCGTTGGCGAAGGGGTAA Protein sequence : MDDLVFAGNKALYLVLILSGWPTIVATVIGLLVGLFQTVTQLQEQTLPFGIKLLGVCLCLFLLSGWYGEVLLSYGRQVIF LALAKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 4e-27 | 99 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 4e-27 | 99 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 4e-27 | 99 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 4e-27 | 99 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 8e-20 | 71 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 3e-18 | 69 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 3e-18 | 68 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 6e-11 | 52 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 2e-08 | 48 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 7e-07 | 48 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 7e-07 | 48 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 7e-07 | 48 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 1e-05 | 45 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 2e-06 | 44 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 7e-07 | 41 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-04 | 41 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 1e-04 | 41 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 7e-07 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG0550 | Protein | 1e-27 | 99 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG1013 | Protein | 3e-19 | 71 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG2454 | Protein | 3e-12 | 56 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG1772 | Protein | 1e-15 | 54 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG0187 | Protein | 0.001 | 50 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG0395 | Protein | 5e-07 | 48 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG0043 | Protein | 1e-04 | 42 |
| A464_2913 | YP_008323507.1 | Type III secretion inner membrane protein | VFG2132 | Protein | 5e-08 | 41 |
