Gene Information

Name : A464_2912 (A464_2912)
Accession : YP_008323506.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2898940 - 2899731 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGTTTTATGCGTTGTACTTTGAAATTCATAACCTGGTTGCCGCTGCGGCAATGGGATTTGCTCGTGTGGCGCCGATTTT
TTTCTTTCTGCCCTTTTTAAATAGCGGGGTATTAAGCGGCGCGCCGAGAAATGCCATTATCGTACTGGTGGCGCTGGGAG
TATGGCCGCATGAACTGAGTGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAATTCTGCAAGAAGCTGCGGTA
GGCGTTATGCTGGGCTGCCTGCTGTCGTGGCCTTTTTGGGTATTACATGCGTTGGGCTGTATCATCGATAACCAGCGAGG
CGCAACGCTCAGTAGCAGTATCGATCCGGCAAATGGCATTGATACCTCGGAAATGGCTAATTTTCTGAACATGTTTGCCG
CGGTCGTGTATTTACAAAATGGCGGGCTGGTTACCATGGTTGACGTCTTAAATAAAAGCTATCAGCTATGCGATCCAATG
AATGAGTGTACGCCTTCATTACCGCCGTTATTAACGTTTATTAATCAGGTGGCGCAAAATGCGTTAGTTCTGGCCAGTCC
GGTCGTATTGGTTTTGTTGCTGTCAGAGGTCTTTCTGGGATTATTGTCGCGTTTTGCTCCCCAGATGAACGCGTTTGCTA
TTTCACTGACGGTGAAAAGCGGTATCGCGGTATTAATCATGCTGTTTTATTTCTCTCCAGTACTCCCGGACAATGTGCTG
CGACTGTCTTTCCAGGCCACGGGATTAAGTAGCTGGTTCTACGAGCGGGGAGCAACGCATGTCGTCGAATAA

Protein sequence :
MFYALYFEIHNLVAAAAMGFARVAPIFFFLPFLNSGVLSGAPRNAIIVLVALGVWPHELSEAPPFLSVAMIPLILQEAAV
GVMLGCLLSWPFWVLHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLFYFSPVLPDNVL
RLSFQATGLSSWFYERGATHVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 7e-98 97
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-96 96
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-96 96
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 8e-96 95
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 2e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2912 YP_008323506.1 Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein VFG0549 Protein 3e-98 97
A464_2912 YP_008323506.1 Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein VFG1014 Protein 6e-34 52
A464_2912 YP_008323506.1 Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein VFG2453 Protein 5e-28 44
A464_2912 YP_008323506.1 Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein VFG1771 Protein 5e-22 41