Gene Information

Name : A464_2909 (A464_2909)
Accession : YP_008323503.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : cell invasion protein SipB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2895464 - 2897245 bp
Length : 1782 bp
Strand : -
Note : -

DNA sequence :
ATGGTAAATGACGCAAGTAGCATTAGCCGCAGCGGATATACCCAAAATCCGCGCCTCGCAGAGGCGGCTTTTGAGGGCGT
TCGTAAGAACACGGACTTTTTAAAAGCGGCGGATAAAGCGTTTAAAGATGTGGTGGCCACGAAAGCAGGCGATCTTAAAG
CGGGTACAAGGTCCGGAGAGACCACGATAAATACGATCAGCCTGACGCCGCCTACGGACGCCGCCAAAGAAAAGCTCTCC
AGCGAAGGTCAATTGACGCTGCTGCTTGGCAAACTCATGACGCTACTGGGCGATGTTTCGCTGTCTCAACTGGAGTCTCG
TCTGGCGGTATGGCAGGCGATGATTGAGTCACAAAAAGAGATGGGTATTCAGGTATCGAAAGAATTCCAGTCGGCTCTGG
GAGAGGCTCAGGAGGCGACGGATCTCTATGAAGCCAGTATCAAAAAAACGGATACCGCCAAGAGTGTTTATGACGCGGCG
GCCAAAAAACTGACGCAGGCGCAAAATAAACTGCAATCGCTGGACCCGGCTGACCCCAGCTATGCACAAGCTGAAGCCGC
AGTAGAGCAGGCCGGTAAAGAAGCGACGGAGGCGAAAGAGGCCTTAGATAAGGCCGCGGATGCGACGGTTAAAGCAGGCA
CAGACGCAAAAGCGAAAGCCGAAAAAGCGGATAGCATTCTGACCAAATTCCAGGGAACGGCGAATGCCTCCTCTCAGCAG
CAGGTTTCCCAGGGCGAGCAGGATAATCTGTCAAATGTCGCCCGCCTCACCATGCTCATGGCCATGTTTATTGAGATTGT
GGGCAAAAATACAGAAGAAAGCCTGCAAAACGATCTTGCGCTTTTCAGCGCCTTGCAGGAAGGGCGTCAGGCAGAGATGG
AAAAGAAATCGGCTGAATTCCAGGAGGAGACGCGTAAAGCCGAAGAAACAAACCGTATTATGGGGTGTATCGGGAAAGTG
CTCGGCGCGCTGTTGACCATTGTCAGCGTAGTGGGCGCTATTTTTACCGGTGGGGCGAGTCTGGCGCTGGCCGCAGTAGG
GCTTGCAGTAATGGTAGCCGACGAGATTGTGAAGGCGACGACGGGGGTGTCGTTTATCCAACAAGCGCTGAATCCAATTA
TGGAGCATGTGCTGAAGCCGTTAATGGAGCTGATTGGCAAGGCGATTACCAAAGCGCTGGAAGGATTAGGCGTCGATAAG
AAAACCGCAGAAATGGCCGGCAGTATTGTCGGGGCGATTGTCGCAGCCATTGCGATGGTCGCAGTCATTGTGGTGGTCGC
CGTCGTCGGGAAAGGTGCCGCGGCGAAACTGGGTAGCGCGCTGAGCAAAATGATGGGCGAAACGATTAAGAAGCTGGTGC
CTAATGTGCTGAAACAGATGGCGCAAAACAGCAGCAAATTCCTGACCCAGGGAATGCAGCGTATTACGACCAGCCTGGGT
AATGTGGGCAGCAAGATGGGCCTGCAAACGAATACGTTAAGTAAGGAACTGATAGGGAATACTTTAAATAAAGTGACGTT
GGGCATGGAAGTGACGAATACCGCAGCCCAGTCAGCCGGTGGTGTTGCCGAAGGCGTATTTATCAAAAATGCCAGCGAGG
CACTTTCTGATTTTATGCTCGCCCGTTTTGCCATGGACCAGATTCAGCAGTGGCTTAAACAATCCGTAGAAATATTTGGT
GAAAACCAGAAGGTGACTGCGGAACTACAAAAAGTCATGTCTTCTGCGGTACAGCAAAATGCGGATGCGTCGCGTTTTAT
TCTGCGCCAGAGTCGCGCATAA

Protein sequence :
MVNDASSISRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDVVATKAGDLKAGTRSGETTINTISLTPPTDAAKEKLS
SEGQLTLLLGKLMTLLGDVSLSQLESRLAVWQAMIESQKEMGIQVSKEFQSALGEAQEATDLYEASIKKTDTAKSVYDAA
AKKLTQAQNKLQSLDPADPSYAQAEAAVEQAGKEATEAKEALDKAADATVKAGTDAKAKAEKADSILTKFQGTANASSQQ
QVSQGEQDNLSNVARLTMLMAMFIEIVGKNTEESLQNDLALFSALQEGRQAEMEKKSAEFQEETRKAEETNRIMGCIGKV
LGALLTIVSVVGAIFTGGASLALAAVGLAVMVADEIVKATTGVSFIQQALNPIMEHVLKPLMELIGKAITKALEGLGVDK
KTAEMAGSIVGAIVAAIAMVAVIVVVAVVGKGAAAKLGSALSKMMGETIKKLVPNVLKQMAQNSSKFLTQGMQRITTSLG
NVGSKMGLQTNTLSKELIGNTLNKVTLGMEVTNTAAQSAGGVAEGVFIKNASEALSDFMLARFAMDQIQQWLKQSVEIFG
ENQKVTAELQKVMSSAVQQNADASRFILRQSRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipB NP_457279.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 96
sipB NP_806488.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 96
sipB NP_461806.1 translocation machinery component Virulence SPI-1 Protein 0.0 95
sipB YP_217804.1 cell invasion protein Virulence SPI-1 Protein 0.0 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2909 YP_008323503.1 cell invasion protein SipB VFG0546 Protein 0.0 95
A464_2909 YP_008323503.1 cell invasion protein SipB VFG0987 Protein 5e-64 42