Gene Information

Name : A464_2907 (A464_2907)
Accession : YP_008323501.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Cell invasion protein SipD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2893114 - 2894136 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTAATATTCAAAATTATTCCGCTTCTCCTCATCCGGGGCTCGTTGCTGAACGGCCGCAGACTCCTTCGGCGAGCGA
ACACGTCGAGATTGCCGCGGTACCGTCTACCACAGAACATCGCGGCACAGATATCATCTCATTATCGCAGGCGGCGACTA
AAGCCCAGCAGGCACAACAGACGCTGCAGTCAACGCCACCGATCTCTGAAGAGAATAATGACGAGCGCACGCTGGCACGC
CAACAGTTGACCAGCAGCCTGAATGCTCTGGCGAAGTCCGGCGTGTCATTATCCGCAGAACAAAATGAGAACCTGCGAAG
CGCGTTTTCTGCGCCGACCTCGGCCTCATTTAGCGCTTCGCCTATGGCGCAGCCAAAAACAACTATTTCCGATGCTGAGA
TTTGGGAGATGGTTTCCCAAAATATCTCTGCGATAGGTGACAGCTATCTGGGCGTTTATGAAAACGTTGTCGCAGTCTAT
ACCGATTTTTATCAGGCCTTCAGTGACATTCTGTCCAAAATGGGAGGCTGGTTATCACCGGGTAAAGATGGAAATACCGT
TAAGCTAAACGTTAATTCGCTTAAAAGTGAAATAAGTAATCTCATTAATAAATACAACCAAGTAAATCAAAATACGATTT
TATTTCCCACGCAGAACGGTAGTGGCGTAACAACCGCGTCGAGAGCGGAGGCCGAACAGTGGATTAAAGAACTGAATTTA
CCAGACAGCTGCCTAAAGTCGTCAGGTGGCGGTTATGTTGTACTGGTGGATTTGGGGCCACTGAACAAAATGGTAAGCGA
TCTTAATGGAATAGGATCTGGTACTGCCCTAGAAATGGATAACGCCAAATATCAGGCCTGGCAGTCGGGTTTTAAAGCGC
AGGAAGAAAATTTAAAAACAACGCTACAGACGCTGACGCAGAAATACAGCAATGCCAATTCATTGTACGACAACCTGGTC
AAAGTGCTGAGCAGTACGATAAGTAGCAGTCTGGAAACCGCCAAAAGCTTCCTGCAGGGATAA

Protein sequence : 
MLNIQNYSASPHPGLVAERPQTPSASEHVEIAAVPSTTEHRGTDIISLSQAATKAQQAQQTLQSTPPISEENNDERTLAR
QQLTSSLNALAKSGVSLSAEQNENLRSAFSAPTSASFSASPMAQPKTTISDAEIWEMVSQNISAIGDSYLGVYENVVAVY
TDFYQAFSDILSKMGGWLSPGKDGNTVKLNVNSLKSEISNLINKYNQVNQNTILFPTQNGSGVTTASRAEAEQWIKELNL
PDSCLKSSGGGYVVLVDLGPLNKMVSDLNGIGSGTALEMDNAKYQAWQSGFKAQEENLKTTLQTLTQKYSNANSLYDNLV
KVLSSTISSSLETAKSFLQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipD NP_457277.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 4e-123 93
sipD NP_806486.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 4e-123 93
sipD YP_217802.1 cell invasion protein Virulence SPI-1 Protein 1e-112 87
sipD NP_461804.1 translocation machinery component Virulence SPI-1 Protein 5e-114 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2907 YP_008323501.1 Cell invasion protein SipD VFG0544 Protein 2e-114 87