Gene Information

Name : A464_2906 (A464_2906)
Accession : YP_008323500.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Type III secretion injected virulence protein(YopE)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2890978 - 2893032 bp
Length : 2055 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCGACGAAGCTTGCAGCGAATATCTCGGCAATCAGAGAAAGTGCGACTACTTCTCCTTTAGGGGACATTAAAGG
CCCTAAACTGGAAGATTTTCCGGCGCTGGCCAGACATGCGAGCCTGGAGACGTTATTTAAATGTGGGAATGACACTGAAG
CGCTAAAGGCGATTTTCGCCGATTCAGATAACGTTGCTGCCAAGAAAGCGGTAACGGAGTTTGCGACGCTTTTTCGCTCA
GCGCTAAGCGCCACCAGTCAGTCGGCGGCGGCAACAGAGCTGTTGATCAAGGTGGGGGAAGAGTACACTGCGCAGATCAT
GAAAGATGGCCTGAAGGAGAAATCGGCTTTTGGACCATGGCTGCCGGCAACAAAGAAAGCGGAAGCAAAGCTTGAAGCCC
TGCACCAGAAATTGTTAAGCATCATTACCGAGAATACTGGTGGTAATTTAGGGACATTATCGACGAGCTTTGTCACAAAT
GAAGTGATGCCGTATGTTGCCGACTGCATTGAACATCAATTTGGTTGTACGTTAGATCCGCAAACGCGCAGTAATCTTAC
AGCGCTTATTGACAGAGCGGCGGCGAAAACCGTTGATGCTCTGGATATGTGCCATGGAAAATTAACGCAAGAACAGGGTG
TTAACCTGGGTAGGGAAGCAAGGCACCTTGAGCTGAAAGCATTAATCCCCGTATTGTTACGTGATATTTTTACGAAAATT
CCGGTGGACAAACTGCCCGAGGCTAAAACCCCGGAGCCTGTACCTGGGCCGACACCTGATGCCGGCAAAAAGTCCGAACC
CGCTCCTATCAACATTAATATTACTATTGATAGCAGCCAACATAATGTGGATAACAGTCAGCATATTAATAATAGCCGTA
GCCATGTCGATAATAGCCAACGGCATACCGATAGCAGTGTGCATGATAATAGTGTGCATGATAATAGCCGGAAGACAATC
GATAATAGCCGGACAATGATTGATAACAGCGTGCATGATAATAGCCGGAAGACAATCGATCATAGCCGGACAATGATTGA
TAACAGTCAACGCCATACGAGTACCAGCAGTACCGTAACTCATAGCCATTCGCGTATGGAGTCGAATACGCATCACGCCG
AGACGACACATCACGCCAGTACGGGGGCGCTTGAGCATGGCGTGGCAGGTAAAATTGACGTCACGGCACATGCCAAAGCA
GAGGTGACCACTAACACCTCAGCGGAAAGTACTGGCAGCAAGGAGATAACGTCTGACAAGGGAAATACGCCTAAGACGGT
TGTGTTTGATGAGGTCGATGGCGGAGGCAACAAGACGACTATCGGCAAGCCAGTGCAGGCCACCGTACATCGCGTTGATG
ATCATAAAGTACAAAGCCAGAAGGCAGAAGTTGTGAATTTAAAGCCGCTTGCAGGCCAGCAGGCTGGCGTCAATAGTGAG
AAAGTCCAGCTTCAGCAGTCAGAAACGACGGTAGTTACCGGTAATAAAGCCGATACGATCGATAAAGATAAAAATCAGAC
GGATACCACTGGCCAATTTTCTGGTTTGAAATTTAAGCAAAATGCTTTCCTTTCAACAATTCCGAGCGTTACGAATATGC
GTTCCACGCATTTCAATGCCCGGGAAGGATTTCTGGATGTTATACGTAAAGCCCTGGAACCAGATGCTGGCACGCCATTT
CCTGTACGTAGAGCGTTTGACGGGTTACGTTCGGAACTATTGTCCAATGACTCTGTAAAGAGTACTGCGCTGAAAGCGCA
ATGTGGCAACATTGACAACCACCCGGAATTAAAAGTGAAAATTGATACTCTTAAAGAGGTCATTAGTCAGCATCCACAAA
AAGGGAAACTGGCTGAGGTTGCGCAGCTGTTTGCCAGAGAAGCGGGTTTGACAAAACTAAAAGGGGAGACCGACTATTTA
TTAAGTAGCGTACTGGATGGTGTTCTCGGCGATCCCGGCTGGCGTAATGGCACGACTTTTGAGTCATACCTGAATAAACC
TGGTGCGGATCGGGTTATTACTACTGTTGATGGCCTGCACACGCAGTTTTATTAA

Protein sequence :
MQATKLAANISAIRESATTSPLGDIKGPKLEDFPALARHASLETLFKCGNDTEALKAIFADSDNVAAKKAVTEFATLFRS
ALSATSQSAAATELLIKVGEEYTAQIMKDGLKEKSAFGPWLPATKKAEAKLEALHQKLLSIITENTGGNLGTLSTSFVTN
EVMPYVADCIEHQFGCTLDPQTRSNLTALIDRAAAKTVDALDMCHGKLTQEQGVNLGREARHLELKALIPVLLRDIFTKI
PVDKLPEAKTPEPVPGPTPDAGKKSEPAPININITIDSSQHNVDNSQHINNSRSHVDNSQRHTDSSVHDNSVHDNSRKTI
DNSRTMIDNSVHDNSRKTIDHSRTMIDNSQRHTSTSSTVTHSHSRMESNTHHAETTHHASTGALEHGVAGKIDVTAHAKA
EVTTNTSAESTGSKEITSDKGNTPKTVVFDEVDGGGNKTTIGKPVQATVHRVDDHKVQSQKAEVVNLKPLAGQQAGVNSE
KVQLQQSETTVVTGNKADTIDKDKNQTDTTGQFSGLKFKQNAFLSTIPSVTNMRSTHFNAREGFLDVIRKALEPDAGTPF
PVRRAFDGLRSELLSNDSVKSTALKAQCGNIDNHPELKVKIDTLKEVISQHPQKGKLAEVAQLFAREAGLTKLKGETDYL
LSSVLDGVLGDPGWRNGTTFESYLNKPGADRVITTVDGLHTQFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipA NP_461803.1 secreted effector protein Virulence SPI-1 Protein 0.0 68
sipA YP_217801.1 cell invasion protein Virulence SPI-1 Protein 0.0 68
sipA NP_457276.1 pathogenicity island 1 effector protein (function unknown) Virulence SPI-1 Protein 0.0 67
sipA NP_806485.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2906 YP_008323500.1 Type III secretion injected virulence protein(YopE) VFG0543 Protein 0.0 68